Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC4P55056 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC4P55056 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
APOC4P55056 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
APOC4P55056 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC4P55056 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC4P55056 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC4P55056 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC4P55056 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC4P55056 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.4□□□□□ -0.1
APOC4P55056 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
APOC4P55056 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.4□□□□□ -0.1
APOC4P55056 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC4P55056 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 NIFKP9-201ENST00000419265 221 ntBASIC14.4□□□□□ -0.1
APOC4P55056 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.4□□□□□ -0.1
APOC4P55056 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC4P55056 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.4□□□□□ -0.1
APOC4P55056 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC4P55056 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.4□□□□□ -0.1
APOC4P55056 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.4□□□□□ -0.1
APOC4P55056 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC4P55056 AC026471.5-201ENST00000615068 467 ntBASIC14.4□□□□□ -0.1
APOC4P55056 AC073912.3-201ENST00000624414 853 ntBASIC14.4□□□□□ -0.1
APOC4P55056 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC4P55056 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 KRT16P1-201ENST00000399124 1418 ntBASIC14.4□□□□□ -0.1
APOC4P55056 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC4P55056 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC4P55056 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
APOC4P55056 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 FAM197Y1-201ENST00000421178 764 ntBASIC14.39□□□□□ -0.11
APOC4P55056 KRT18P16-201ENST00000510337 1294 ntBASIC14.39□□□□□ -0.11
APOC4P55056 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 C1QL1P1-201ENST00000568105 661 ntBASIC14.39□□□□□ -0.11
APOC4P55056 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.39□□□□□ -0.11
APOC4P55056 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.39□□□□□ -0.11
APOC4P55056 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC4P55056 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOC4P55056 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC4P55056 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOC4P55056 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC4P55056 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC4P55056 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC4P55056 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
APOC4P55056 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC4P55056 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.38□□□□□ -0.11
APOC4P55056 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC4P55056 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
APOC4P55056 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC4P55056 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC4P55056 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC4P55056 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
APOC4P55056 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.38□□□□□ -0.11
APOC4P55056 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms