Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 AP003071.4-201ENST00000562276 1284 ntBASIC20.01■□□□□ 0.79
ATXN3P54252 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.01■□□□□ 0.79
ATXN3P54252 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.01■□□□□ 0.79
ATXN3P54252 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 AC012306.2-201ENST00000609350 630 ntBASIC20.01■□□□□ 0.79
ATXN3P54252 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATXN3P54252 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.01■□□□□ 0.79
ATXN3P54252 AC006128.1-201ENST00000624704 1661 ntBASIC20■□□□□ 0.79
ATXN3P54252 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20■□□□□ 0.79
ATXN3P54252 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATXN3P54252 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATXN3P54252 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ATXN3P54252 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20■□□□□ 0.79
ATXN3P54252 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20■□□□□ 0.79
ATXN3P54252 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20■□□□□ 0.79
ATXN3P54252 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATXN3P54252 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ATXN3P54252 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATXN3P54252 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.99■□□□□ 0.79
ATXN3P54252 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.99■□□□□ 0.79
ATXN3P54252 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ATXN3P54252 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ATXN3P54252 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATXN3P54252 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ATXN3P54252 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.98■□□□□ 0.79
ATXN3P54252 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.98■□□□□ 0.79
ATXN3P54252 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.98■□□□□ 0.79
ATXN3P54252 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.98■□□□□ 0.79
ATXN3P54252 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ATXN3P54252 RN7SL850P-201ENST00000579959 291 ntBASIC19.98■□□□□ 0.79
ATXN3P54252 AL356652.1-201ENST00000615962 565 ntBASIC19.98■□□□□ 0.79
ATXN3P54252 AL590326.2-201ENST00000625139 305 ntBASIC19.98■□□□□ 0.79
ATXN3P54252 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.98■□□□□ 0.79
ATXN3P54252 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ATXN3P54252 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATXN3P54252 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
ATXN3P54252 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATXN3P54252 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms