Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDNFP39905 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
GDNFP39905 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.06■□□□□ 0.32
GDNFP39905 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.06■□□□□ 0.32
GDNFP39905 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.06■□□□□ 0.32
GDNFP39905 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.06■□□□□ 0.32
GDNFP39905 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.06■□□□□ 0.32
GDNFP39905 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.06■□□□□ 0.32
GDNFP39905 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.06■□□□□ 0.32
GDNFP39905 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDNFP39905 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.05■□□□□ 0.32
GDNFP39905 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GDNFP39905 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GDNFP39905 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDNFP39905 AC116050.2-201ENST00000612102 1779 ntBASIC17.05■□□□□ 0.32
GDNFP39905 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.05■□□□□ 0.32
GDNFP39905 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GDNFP39905 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.04■□□□□ 0.32
GDNFP39905 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
GDNFP39905 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.04■□□□□ 0.32
GDNFP39905 AC245052.3-201ENST00000450182 901 ntBASIC17.04■□□□□ 0.32
GDNFP39905 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.04■□□□□ 0.32
GDNFP39905 AC137761.2-201ENST00000561729 223 ntBASIC17.04■□□□□ 0.32
GDNFP39905 AC145350.3-201ENST00000569033 163 ntBASIC17.04■□□□□ 0.32
GDNFP39905 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.04■□□□□ 0.32
GDNFP39905 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GDNFP39905 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 MYCNOS-205ENST00000641950 531 ntBASIC17.04■□□□□ 0.32
GDNFP39905 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.04■□□□□ 0.32
GDNFP39905 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.04■□□□□ 0.32
GDNFP39905 KRT8P36-201ENST00000489121 1440 ntBASIC17.04■□□□□ 0.32
GDNFP39905 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDNFP39905 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDNFP39905 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms