Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP005212.1-201ENST00000581547 1997 ntBASIC24.96■■□□□ 1.59
COL15A1P39059 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.96■■□□□ 1.59
COL15A1P39059 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL15A1P39059 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.96■■□□□ 1.59
COL15A1P39059 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.96■■□□□ 1.59
COL15A1P39059 MFAP1P1-201ENST00000442257 1255 ntBASIC24.96■■□□□ 1.59
COL15A1P39059 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
COL15A1P39059 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL15A1P39059 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
COL15A1P39059 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL15A1P39059 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.96■■□□□ 1.59
COL15A1P39059 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
COL15A1P39059 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.95■■□□□ 1.59
COL15A1P39059 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.59
COL15A1P39059 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.95■■□□□ 1.59
COL15A1P39059 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.95■■□□□ 1.59
COL15A1P39059 BX664615.1-201ENST00000443558 458 ntBASIC24.95■■□□□ 1.59
COL15A1P39059 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.95■■□□□ 1.59
COL15A1P39059 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL15A1P39059 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.95■■□□□ 1.59
COL15A1P39059 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.95■■□□□ 1.59
COL15A1P39059 AC130371.2-201ENST00000619443 611 ntBASIC24.95■■□□□ 1.59
COL15A1P39059 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL15A1P39059 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL15A1P39059 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL15A1P39059 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
COL15A1P39059 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.95■■□□□ 1.58
COL15A1P39059 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL15A1P39059 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
COL15A1P39059 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.94■■□□□ 1.58
COL15A1P39059 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.94■■□□□ 1.58
COL15A1P39059 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 AC004951.3-201ENST00000418645 1148 ntBASIC24.94■■□□□ 1.58
COL15A1P39059 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 AC020907.5-201ENST00000624372 1936 ntBASIC24.94■■□□□ 1.58
COL15A1P39059 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL15A1P39059 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
COL15A1P39059 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.93■■□□□ 1.58
COL15A1P39059 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.93■■□□□ 1.58
COL15A1P39059 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.93■■□□□ 1.58
COL15A1P39059 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
COL15A1P39059 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
COL15A1P39059 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
COL15A1P39059 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.93■■□□□ 1.58
COL15A1P39059 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.93■■□□□ 1.58
COL15A1P39059 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
COL15A1P39059 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC24.93■■□□□ 1.58
COL15A1P39059 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.93■■□□□ 1.58
COL15A1P39059 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
COL15A1P39059 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.93■■□□□ 1.58
COL15A1P39059 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL15A1P39059 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.92■■□□□ 1.58
COL15A1P39059 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.92■■□□□ 1.58
COL15A1P39059 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.92■■□□□ 1.58
COL15A1P39059 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
COL15A1P39059 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.92■■□□□ 1.58
COL15A1P39059 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.92■■□□□ 1.58
COL15A1P39059 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 FAM207BP-201ENST00000447172 505 ntBASIC24.92■■□□□ 1.58
COL15A1P39059 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.92■■□□□ 1.58
COL15A1P39059 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.92■■□□□ 1.58
COL15A1P39059 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
COL15A1P39059 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.92■■□□□ 1.58
COL15A1P39059 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.92■■□□□ 1.58
COL15A1P39059 AL138966.2-201ENST00000621997 464 ntBASIC24.92■■□□□ 1.58
COL15A1P39059 AL358472.4-201ENST00000633140 710 ntBASIC24.92■■□□□ 1.58
COL15A1P39059 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL15A1P39059 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL15A1P39059 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
COL15A1P39059 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.91■■□□□ 1.58
COL15A1P39059 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL15A1P39059 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL15A1P39059 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL15A1P39059 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.91■■□□□ 1.58
COL15A1P39059 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.91■■□□□ 1.58
COL15A1P39059 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
COL15A1P39059 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
COL15A1P39059 FAM8A6P-201ENST00000407496 1135 ntBASIC24.91■■□□□ 1.58
COL15A1P39059 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL15A1P39059 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms