Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CHKAP35790 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CHKAP35790 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.72■□□□□ 0.91
CHKAP35790 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 AL691432.2-201ENST00000607222 2038 ntBASIC20.71■□□□□ 0.91
CHKAP35790 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHKAP35790 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHKAP35790 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHKAP35790 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.71■□□□□ 0.91
CHKAP35790 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.71■□□□□ 0.91
CHKAP35790 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.71■□□□□ 0.91
CHKAP35790 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.71■□□□□ 0.91
CHKAP35790 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.71■□□□□ 0.91
CHKAP35790 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.71■□□□□ 0.91
CHKAP35790 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.71■□□□□ 0.91
CHKAP35790 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CHKAP35790 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 AL020996.1-203ENST00000536896 2307 ntBASIC20.71■□□□□ 0.91
CHKAP35790 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.71■□□□□ 0.91
CHKAP35790 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHKAP35790 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.7■□□□□ 0.9
CHKAP35790 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.7■□□□□ 0.9
CHKAP35790 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.7■□□□□ 0.9
CHKAP35790 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 DPP3P2-201ENST00000416030 1696 ntBASIC20.7■□□□□ 0.9
CHKAP35790 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHKAP35790 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
CHKAP35790 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHKAP35790 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHKAP35790 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 AC098818.2-201ENST00000564925 2320 ntBASIC20.69■□□□□ 0.9
CHKAP35790 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.69■□□□□ 0.9
CHKAP35790 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.69■□□□□ 0.9
CHKAP35790 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.69■□□□□ 0.9
CHKAP35790 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.69■□□□□ 0.9
CHKAP35790 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.69■□□□□ 0.9
CHKAP35790 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.69■□□□□ 0.9
CHKAP35790 PRKY-204ENST00000533551 1019 ntBASIC20.69■□□□□ 0.9
CHKAP35790 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.69■□□□□ 0.9
CHKAP35790 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.69■□□□□ 0.9
CHKAP35790 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.69■□□□□ 0.9
CHKAP35790 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.69■□□□□ 0.9
CHKAP35790 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.69■□□□□ 0.9
CHKAP35790 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.69■□□□□ 0.9
CHKAP35790 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 KRT8P20-201ENST00000423953 1409 ntBASIC20.69■□□□□ 0.9
CHKAP35790 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHKAP35790 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 PTBP1P-201ENST00000554374 1601 ntBASIC20.68■□□□□ 0.9
CHKAP35790 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHKAP35790 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHKAP35790 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.68■□□□□ 0.9
CHKAP35790 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CHKAP35790 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms