Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 AC092338.2-201ENST00000568827 1415 ntBASIC21.53■■□□□ 1.04
HOXC8P31273 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.53■■□□□ 1.04
HOXC8P31273 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HOXC8P31273 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC8P31273 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC8P31273 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
HOXC8P31273 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.52■■□□□ 1.04
HOXC8P31273 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.52■■□□□ 1.04
HOXC8P31273 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC8P31273 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC8P31273 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HOXC8P31273 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HOXC8P31273 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.52■■□□□ 1.03
HOXC8P31273 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HOXC8P31273 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC8P31273 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC8P31273 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 LIN28AP1-201ENST00000429574 405 ntBASIC21.51■■□□□ 1.03
HOXC8P31273 BX664615.1-201ENST00000443558 458 ntBASIC21.51■■□□□ 1.03
HOXC8P31273 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.51■■□□□ 1.03
HOXC8P31273 AC010653.2-201ENST00000623505 997 ntBASIC21.51■■□□□ 1.03
HOXC8P31273 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 AC116562.4-202ENST00000641738 218 ntBASIC21.51■■□□□ 1.03
HOXC8P31273 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.51■■□□□ 1.03
HOXC8P31273 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HOXC8P31273 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HOXC8P31273 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HOXC8P31273 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.5■■□□□ 1.03
HOXC8P31273 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 AC007663.1-201ENST00000438948 1240 ntBASIC21.5■■□□□ 1.03
HOXC8P31273 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 AL160286.2-201ENST00000567150 934 ntBASIC21.5■■□□□ 1.03
HOXC8P31273 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.5■■□□□ 1.03
HOXC8P31273 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.5■■□□□ 1.03
HOXC8P31273 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HOXC8P31273 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HOXC8P31273 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.49■■□□□ 1.03
HOXC8P31273 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.49■■□□□ 1.03
HOXC8P31273 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 ATP5G1P1-201ENST00000448724 379 ntBASIC21.49■■□□□ 1.03
HOXC8P31273 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.49■■□□□ 1.03
HOXC8P31273 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HOXC8P31273 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HOXC8P31273 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.49■■□□□ 1.03
HOXC8P31273 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HOXC8P31273 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.48■■□□□ 1.03
HOXC8P31273 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HOXC8P31273 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC8P31273 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HOXC8P31273 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HOXC8P31273 CCR12P-201ENST00000446203 998 ntBASIC21.48■■□□□ 1.03
HOXC8P31273 AC063952.2-201ENST00000498792 1227 ntBASIC21.48■■□□□ 1.03
HOXC8P31273 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.48■■□□□ 1.03
HOXC8P31273 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HOXC8P31273 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC8P31273 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC8P31273 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.47■■□□□ 1.03
HOXC8P31273 KRT8P41-201ENST00000533985 1514 ntBASIC21.47■■□□□ 1.03
HOXC8P31273 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC8P31273 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC8P31273 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC8P31273 AC117947.1-201ENST00000427448 529 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms