Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM179-206ENST00000616017 1645 ntBASIC16.95■□□□□ 0.3
CD40P25942 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
CD40P25942 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.95■□□□□ 0.3
CD40P25942 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD40P25942 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 AC092667.1-201ENST00000434301 2586 ntBASIC16.94■□□□□ 0.3
CD40P25942 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CD40P25942 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.94■□□□□ 0.3
CD40P25942 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.94■□□□□ 0.3
CD40P25942 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CD40P25942 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CD40P25942 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.94■□□□□ 0.3
CD40P25942 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CD40P25942 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.94■□□□□ 0.3
CD40P25942 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CD40P25942 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CD40P25942 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.94■□□□□ 0.3
CD40P25942 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD40P25942 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CD40P25942 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.93■□□□□ 0.3
CD40P25942 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.93■□□□□ 0.3
CD40P25942 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.93■□□□□ 0.3
CD40P25942 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.93■□□□□ 0.3
CD40P25942 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 AL445675.2-201ENST00000620291 557 ntBASIC16.93■□□□□ 0.3
CD40P25942 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD40P25942 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.93■□□□□ 0.3
CD40P25942 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 AL391422.3-201ENST00000603791 2761 ntBASIC16.93■□□□□ 0.3
CD40P25942 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.93■□□□□ 0.3
CD40P25942 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CD40P25942 AC138932.1-201ENST00000534164 6830 ntBASIC16.93■□□□□ 0.3
CD40P25942 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CD40P25942 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.92■□□□□ 0.3
CD40P25942 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 AL691432.2-201ENST00000607222 2038 ntBASIC16.92■□□□□ 0.3
CD40P25942 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.92■□□□□ 0.3
CD40P25942 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.92■□□□□ 0.3
CD40P25942 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.92■□□□□ 0.3
CD40P25942 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
CD40P25942 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.92■□□□□ 0.3
CD40P25942 REXO1L10P-201ENST00000615707 1290 ntBASIC16.92■□□□□ 0.3
CD40P25942 AL031985.4-201ENST00000642138 673 ntBASIC16.92■□□□□ 0.3
CD40P25942 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CD40P25942 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD40P25942 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.91■□□□□ 0.3
CD40P25942 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 AC211429.1-201ENST00000415277 523 ntBASIC16.91■□□□□ 0.3
CD40P25942 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD40P25942 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.91■□□□□ 0.3
CD40P25942 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms