Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MMP8P22894 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.67■□□□□ 0.9
MMP8P22894 KRT18P6-201ENST00000555540 1265 ntBASIC20.67■□□□□ 0.9
MMP8P22894 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.67■□□□□ 0.9
MMP8P22894 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MMP8P22894 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP8P22894 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP8P22894 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MMP8P22894 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP8P22894 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
MMP8P22894 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP8P22894 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
MMP8P22894 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP8P22894 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP8P22894 YBX1P10-201ENST00000444752 975 ntBASIC20.66■□□□□ 0.9
MMP8P22894 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.66■□□□□ 0.9
MMP8P22894 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.66■□□□□ 0.9
MMP8P22894 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP8P22894 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MMP8P22894 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
MMP8P22894 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
MMP8P22894 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
MMP8P22894 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 AP003097.1-201ENST00000530657 1135 ntBASIC20.65■□□□□ 0.9
MMP8P22894 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
MMP8P22894 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.65■□□□□ 0.9
MMP8P22894 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.65■□□□□ 0.9
MMP8P22894 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP8P22894 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MMP8P22894 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.64■□□□□ 0.9
MMP8P22894 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP8P22894 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP8P22894 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP8P22894 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP8P22894 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP8P22894 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP8P22894 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
MMP8P22894 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP8P22894 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP8P22894 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MMP8P22894 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 AC026366.1-201ENST00000488803 879 ntBASIC20.63■□□□□ 0.89
MMP8P22894 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.63■□□□□ 0.89
MMP8P22894 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.63■□□□□ 0.89
MMP8P22894 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MMP8P22894 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP8P22894 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms