Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.42■□□□□ 0.86
HMGA1P17096 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.42■□□□□ 0.86
HMGA1P17096 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA1P17096 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA1P17096 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA1P17096 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGA1P17096 AP005242.2-201ENST00000580065 1175 ntBASIC20.42■□□□□ 0.86
HMGA1P17096 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA1P17096 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HMGA1P17096 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HMGA1P17096 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGA1P17096 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGA1P17096 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGA1P17096 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGA1P17096 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA1P17096 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA1P17096 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HMGA1P17096 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGA1P17096 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGA1P17096 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGA1P17096 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA1P17096 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.41■□□□□ 0.86
HMGA1P17096 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA1P17096 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGA1P17096 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGA1P17096 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA1P17096 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA1P17096 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA1P17096 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGA1P17096 Z85996.1-201ENST00000494644 937 ntBASIC20.4■□□□□ 0.86
HMGA1P17096 AC097488.1-201ENST00000507834 756 ntBASIC20.4■□□□□ 0.86
HMGA1P17096 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA1P17096 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.4■□□□□ 0.86
HMGA1P17096 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGA1P17096 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGA1P17096 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGA1P17096 AP000692.2-201ENST00000608391 879 ntBASIC20.4■□□□□ 0.86
HMGA1P17096 AC010331.1-201ENST00000611423 582 ntBASIC20.4■□□□□ 0.86
HMGA1P17096 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGA1P17096 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGA1P17096 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGA1P17096 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.39■□□□□ 0.86
HMGA1P17096 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HMGA1P17096 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HMGA1P17096 AC099778.1-201ENST00000568593 1911 ntBASIC20.39■□□□□ 0.86
HMGA1P17096 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HMGA1P17096 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
HMGA1P17096 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.39■□□□□ 0.85
HMGA1P17096 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 RN7SL850P-201ENST00000579959 291 ntBASIC20.39■□□□□ 0.85
HMGA1P17096 AC011298.2-201ENST00000617989 482 ntBASIC20.39■□□□□ 0.85
HMGA1P17096 AC005363.2-201ENST00000618631 242 ntBASIC20.39■□□□□ 0.85
HMGA1P17096 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HMGA1P17096 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGA1P17096 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
HMGA1P17096 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
HMGA1P17096 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA1P17096 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HMGA1P17096 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA1P17096 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HMGA1P17096 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGA1P17096 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGA1P17096 AC004951.3-201ENST00000418645 1148 ntBASIC20.38■□□□□ 0.85
HMGA1P17096 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms