Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCK1P16333 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NCK1P16333 AC104581.1-202ENST00000635932 2618 ntBASIC18.53■□□□□ 0.56
NCK1P16333 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCK1P16333 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
NCK1P16333 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCK1P16333 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
NCK1P16333 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCK1P16333 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.53■□□□□ 0.56
NCK1P16333 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCK1P16333 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCK1P16333 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCK1P16333 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCK1P16333 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.52■□□□□ 0.56
NCK1P16333 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NCK1P16333 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
NCK1P16333 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
NCK1P16333 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.52■□□□□ 0.56
NCK1P16333 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.52■□□□□ 0.56
NCK1P16333 KRT18P61-201ENST00000585825 1298 ntBASIC18.52■□□□□ 0.56
NCK1P16333 AC016405.3-201ENST00000607710 860 ntBASIC18.52■□□□□ 0.56
NCK1P16333 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.52■□□□□ 0.56
NCK1P16333 MYCNOS-205ENST00000641950 531 ntBASIC18.52■□□□□ 0.56
NCK1P16333 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NCK1P16333 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCK1P16333 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCK1P16333 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCK1P16333 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCK1P16333 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
NCK1P16333 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.51■□□□□ 0.55
NCK1P16333 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.51■□□□□ 0.55
NCK1P16333 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 KRT8P20-201ENST00000423953 1409 ntBASIC18.51■□□□□ 0.55
NCK1P16333 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 AC005082.1-201ENST00000413042 2259 ntBASIC18.51■□□□□ 0.55
NCK1P16333 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NCK1P16333 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.51■□□□□ 0.55
NCK1P16333 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 AL591742.1-201ENST00000604433 565 ntBASIC18.51■□□□□ 0.55
NCK1P16333 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NCK1P16333 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NCK1P16333 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.51■□□□□ 0.55
NCK1P16333 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NCK1P16333 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 AL049812.1-201ENST00000432563 2267 ntBASIC18.51■□□□□ 0.55
NCK1P16333 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCK1P16333 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NCK1P16333 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NCK1P16333 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.5■□□□□ 0.55
NCK1P16333 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.5■□□□□ 0.55
NCK1P16333 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.5■□□□□ 0.55
NCK1P16333 YBX1P1-201ENST00000445822 960 ntBASIC18.5■□□□□ 0.55
NCK1P16333 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.5■□□□□ 0.55
NCK1P16333 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.5■□□□□ 0.55
NCK1P16333 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
NCK1P16333 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.5■□□□□ 0.55
NCK1P16333 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NCK1P16333 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCK1P16333 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms