Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
VTNP04004 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 RCN1P1-201ENST00000400413 996 ntBASIC21.55■■□□□ 1.04
VTNP04004 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 B3GAT3P1-201ENST00000471720 806 ntBASIC21.55■■□□□ 1.04
VTNP04004 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.55■■□□□ 1.04
VTNP04004 FITM1-202ENST00000559294 800 ntBASIC21.55■■□□□ 1.04
VTNP04004 AC026271.3-201ENST00000571884 352 ntBASIC21.55■■□□□ 1.04
VTNP04004 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.55■■□□□ 1.04
VTNP04004 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.55■■□□□ 1.04
VTNP04004 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.55■■□□□ 1.04
VTNP04004 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 FSCN1P1-201ENST00000568912 1481 ntBASIC21.55■■□□□ 1.04
VTNP04004 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VTNP04004 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VTNP04004 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.55■■□□□ 1.04
VTNP04004 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.55■■□□□ 1.04
VTNP04004 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.54■■□□□ 1.04
VTNP04004 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.54■■□□□ 1.04
VTNP04004 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
VTNP04004 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.54■■□□□ 1.04
VTNP04004 AC131212.4-201ENST00000623606 975 ntBASIC21.54■■□□□ 1.04
VTNP04004 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
VTNP04004 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.54■■□□□ 1.04
VTNP04004 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VTNP04004 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.54■■□□□ 1.04
VTNP04004 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.53■■□□□ 1.04
VTNP04004 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
VTNP04004 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.53■■□□□ 1.04
VTNP04004 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VTNP04004 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.53■■□□□ 1.04
VTNP04004 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.53■■□□□ 1.04
VTNP04004 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.53■■□□□ 1.04
VTNP04004 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
VTNP04004 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
VTNP04004 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTNP04004 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 AL157384.1-201ENST00000445995 2473 ntBASIC21.52■■□□□ 1.04
VTNP04004 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.52■■□□□ 1.04
VTNP04004 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
VTNP04004 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
VTNP04004 MIR1224-201ENST00000408193 85 ntBASIC21.52■■□□□ 1.04
VTNP04004 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.52■■□□□ 1.04
VTNP04004 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.52■■□□□ 1.04
VTNP04004 AC145285.6-201ENST00000604632 637 ntBASIC21.52■■□□□ 1.04
VTNP04004 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.52■■□□□ 1.04
VTNP04004 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VTNP04004 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTNP04004 CLDN5-201ENST00000403084 2357 ntBASIC21.52■■□□□ 1.04
VTNP04004 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
VTNP04004 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.52■■□□□ 1.03
VTNP04004 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTNP04004 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.51■■□□□ 1.03
VTNP04004 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms