Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.3■□□□□ 0.84
IFNB1P01574 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IFNB1P01574 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.3■□□□□ 0.84
IFNB1P01574 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
IFNB1P01574 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.3■□□□□ 0.84
IFNB1P01574 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.3■□□□□ 0.84
IFNB1P01574 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
IFNB1P01574 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.3■□□□□ 0.84
IFNB1P01574 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.29■□□□□ 0.84
IFNB1P01574 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.29■□□□□ 0.84
IFNB1P01574 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.29■□□□□ 0.84
IFNB1P01574 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
IFNB1P01574 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.29■□□□□ 0.84
IFNB1P01574 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 AC080038.1-201ENST00000611274 1154 ntBASIC20.29■□□□□ 0.84
IFNB1P01574 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
IFNB1P01574 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.29■□□□□ 0.84
IFNB1P01574 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
IFNB1P01574 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IFNB1P01574 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.28■□□□□ 0.84
IFNB1P01574 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
IFNB1P01574 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.28■□□□□ 0.84
IFNB1P01574 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.28■□□□□ 0.84
IFNB1P01574 IKBKGP1-201ENST00000612193 1073 ntBASIC20.28■□□□□ 0.84
IFNB1P01574 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.28■□□□□ 0.84
IFNB1P01574 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
IFNB1P01574 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
IFNB1P01574 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFNB1P01574 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.27■□□□□ 0.84
IFNB1P01574 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.27■□□□□ 0.84
IFNB1P01574 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 AC092437.1-201ENST00000624794 1048 ntBASIC20.27■□□□□ 0.84
IFNB1P01574 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 AL020996.1-203ENST00000536896 2307 ntBASIC20.27■□□□□ 0.84
IFNB1P01574 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFNB1P01574 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.27■□□□□ 0.83
IFNB1P01574 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFNB1P01574 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
IFNB1P01574 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
IFNB1P01574 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 BX323043.1-201ENST00000641006 1765 ntBASIC20.26■□□□□ 0.83
IFNB1P01574 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
IFNB1P01574 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.26■□□□□ 0.83
IFNB1P01574 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 AC133552.2-202ENST00000575694 574 ntBASIC20.26■□□□□ 0.83
IFNB1P01574 AC073111.5-205ENST00000641717 521 ntBASIC20.26■□□□□ 0.83
IFNB1P01574 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
IFNB1P01574 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
IFNB1P01574 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
IFNB1P01574 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFNB1P01574 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
IFNB1P01574 Z82202.1-201ENST00000623446 1880 ntBASIC20.26■□□□□ 0.83
IFNB1P01574 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms