Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TIMP1P01033 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.34■■□□□ 1.01
TIMP1P01033 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.34■■□□□ 1.01
TIMP1P01033 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TIMP1P01033 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TIMP1P01033 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TIMP1P01033 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.33■■□□□ 1.01
TIMP1P01033 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.33■■□□□ 1.01
TIMP1P01033 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TIMP1P01033 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TIMP1P01033 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TIMP1P01033 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TIMP1P01033 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TIMP1P01033 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.33■■□□□ 1.01
TIMP1P01033 AP003041.3-201ENST00000527151 707 ntBASIC21.33■■□□□ 1.01
TIMP1P01033 AC012313.10-201ENST00000623509 926 ntBASIC21.33■■□□□ 1.01
TIMP1P01033 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.33■■□□□ 1.01
TIMP1P01033 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TIMP1P01033 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TIMP1P01033 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TIMP1P01033 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 AC112907.2-201ENST00000448639 330 ntBASIC21.32■■□□□ 1
TIMP1P01033 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.32■■□□□ 1
TIMP1P01033 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.32■■□□□ 1
TIMP1P01033 ZNF444P1-201ENST00000559497 298 ntBASIC21.32■■□□□ 1
TIMP1P01033 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.32■■□□□ 1
TIMP1P01033 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.32■■□□□ 1
TIMP1P01033 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 TMEM179-206ENST00000616017 1645 ntBASIC21.32■■□□□ 1
TIMP1P01033 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.32■■□□□ 1
TIMP1P01033 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.32■■□□□ 1
TIMP1P01033 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.31■■□□□ 1
TIMP1P01033 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.31■■□□□ 1
TIMP1P01033 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.31■■□□□ 1
TIMP1P01033 ATP5G2P1-201ENST00000433580 426 ntBASIC21.31■■□□□ 1
TIMP1P01033 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.31■■□□□ 1
TIMP1P01033 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.31■■□□□ 1
TIMP1P01033 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.31■■□□□ 1
TIMP1P01033 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.31■■□□□ 1
TIMP1P01033 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.31■■□□□ 1
TIMP1P01033 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TIMP1P01033 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.3■■□□□ 1
TIMP1P01033 FP700111.2-201ENST00000619190 1892 ntBASIC21.3■■□□□ 1
TIMP1P01033 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
TIMP1P01033 KRT8P45-201ENST00000414328 1447 ntBASIC21.3■■□□□ 1
TIMP1P01033 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 AP000523.1-201ENST00000398242 1049 ntBASIC21.3■■□□□ 1
TIMP1P01033 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.3■■□□□ 1
TIMP1P01033 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.3■■□□□ 1
TIMP1P01033 AL160286.2-201ENST00000567150 934 ntBASIC21.3■■□□□ 1
TIMP1P01033 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.3■■□□□ 1
TIMP1P01033 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TIMP1P01033 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
TIMP1P01033 AC083849.1-201ENST00000615227 514 ntBASIC21.3■■□□□ 1
TIMP1P01033 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TIMP1P01033 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
TIMP1P01033 KRT8P8-201ENST00000434750 1448 ntBASIC21.29■■□□□ 1
TIMP1P01033 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TIMP1P01033 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.29■■□□□ 1
TIMP1P01033 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.29■■□□□ 1
TIMP1P01033 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TIMP1P01033 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms