Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.92■■□□□ 1.1
PGK1P00558 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.92■■□□□ 1.1
PGK1P00558 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGK1P00558 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.91■■□□□ 1.1
PGK1P00558 AC006128.1-201ENST00000624704 1661 ntBASIC21.91■■□□□ 1.1
PGK1P00558 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.91■■□□□ 1.1
PGK1P00558 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.91■■□□□ 1.1
PGK1P00558 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PGK1P00558 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PGK1P00558 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.91■■□□□ 1.1
PGK1P00558 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.91■■□□□ 1.1
PGK1P00558 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.91■■□□□ 1.1
PGK1P00558 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.91■■□□□ 1.1
PGK1P00558 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 SLC25A1P2-201ENST00000430693 912 ntBASIC21.91■■□□□ 1.1
PGK1P00558 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.91■■□□□ 1.1
PGK1P00558 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.91■■□□□ 1.1
PGK1P00558 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGK1P00558 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGK1P00558 AC007225.1-201ENST00000566331 1836 ntBASIC21.9■■□□□ 1.1
PGK1P00558 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.9■■□□□ 1.1
PGK1P00558 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGK1P00558 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
PGK1P00558 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGK1P00558 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGK1P00558 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.9■■□□□ 1.1
PGK1P00558 AC092647.4-201ENST00000457211 535 ntBASIC21.9■■□□□ 1.1
PGK1P00558 COX11P1-201ENST00000489116 835 ntBASIC21.9■■□□□ 1.1
PGK1P00558 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
PGK1P00558 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.9■■□□□ 1.1
PGK1P00558 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.9■■□□□ 1.1
PGK1P00558 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
PGK1P00558 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.9■■□□□ 1.1
PGK1P00558 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PGK1P00558 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.9■■□□□ 1.1
PGK1P00558 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
PGK1P00558 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PGK1P00558 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.9■■□□□ 1.1
PGK1P00558 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PGK1P00558 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PGK1P00558 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGK1P00558 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.89■■□□□ 1.09
PGK1P00558 KRT18P56-201ENST00000507275 550 ntBASIC21.89■■□□□ 1.09
PGK1P00558 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.89■■□□□ 1.09
PGK1P00558 AL121894.2-201ENST00000602977 491 ntBASIC21.89■■□□□ 1.09
PGK1P00558 AC011558.1-201ENST00000623459 338 ntBASIC21.89■■□□□ 1.09
PGK1P00558 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
PGK1P00558 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.89■■□□□ 1.09
PGK1P00558 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.89■■□□□ 1.09
PGK1P00558 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGK1P00558 AC092720.2-201ENST00000602388 1665 ntBASIC21.88■■□□□ 1.09
PGK1P00558 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.88■■□□□ 1.09
PGK1P00558 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.88■■□□□ 1.09
PGK1P00558 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.88■■□□□ 1.09
PGK1P00558 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PGK1P00558 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.88■■□□□ 1.09
PGK1P00558 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
PGK1P00558 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.88■■□□□ 1.09
PGK1P00558 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.88■■□□□ 1.09
PGK1P00558 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.88■■□□□ 1.09
PGK1P00558 AC010653.2-201ENST00000623505 997 ntBASIC21.88■■□□□ 1.09
PGK1P00558 AC141257.4-201ENST00000634557 245 ntBASIC21.88■■□□□ 1.09
PGK1P00558 AC136944.6-201ENST00000634818 245 ntBASIC21.88■■□□□ 1.09
PGK1P00558 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.88■■□□□ 1.09
PGK1P00558 AC092338.2-201ENST00000568827 1415 ntBASIC21.88■■□□□ 1.09
PGK1P00558 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGK1P00558 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
PGK1P00558 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.87■■□□□ 1.09
PGK1P00558 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PGK1P00558 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PGK1P00558 Z85996.1-201ENST00000494644 937 ntBASIC21.87■■□□□ 1.09
PGK1P00558 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.87■■□□□ 1.09
PGK1P00558 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 AP000550.4-202ENST00000639755 178 ntBASIC21.87■■□□□ 1.09
PGK1P00558 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PGK1P00558 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms