Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ALDH1A1P00352 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.5■■□□□ 1.19
ALDH1A1P00352 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ALDH1A1P00352 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ALDH1A1P00352 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.5■■□□□ 1.19
ALDH1A1P00352 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.5■■□□□ 1.19
ALDH1A1P00352 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.5■■□□□ 1.19
ALDH1A1P00352 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ALDH1A1P00352 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ALDH1A1P00352 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 KRT8P45-201ENST00000414328 1447 ntBASIC22.49■■□□□ 1.19
ALDH1A1P00352 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 PVRIG2P-201ENST00000435460 978 ntBASIC22.49■■□□□ 1.19
ALDH1A1P00352 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ALDH1A1P00352 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ALDH1A1P00352 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ALDH1A1P00352 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ALDH1A1P00352 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.48■■□□□ 1.19
ALDH1A1P00352 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ALDH1A1P00352 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 CKBP1-201ENST00000565489 1086 ntBASIC22.48■■□□□ 1.19
ALDH1A1P00352 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ALDH1A1P00352 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.48■■□□□ 1.19
ALDH1A1P00352 PHGDH-210ENST00000641115 1638 ntBASIC22.48■■□□□ 1.19
ALDH1A1P00352 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ALDH1A1P00352 KRT8P10-201ENST00000450021 1447 ntBASIC22.48■■□□□ 1.19
ALDH1A1P00352 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ALDH1A1P00352 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ALDH1A1P00352 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 AC092329.2-201ENST00000598402 547 ntBASIC22.47■■□□□ 1.19
ALDH1A1P00352 AC092119.3-201ENST00000612618 583 ntBASIC22.47■■□□□ 1.19
ALDH1A1P00352 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ALDH1A1P00352 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ALDH1A1P00352 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
ALDH1A1P00352 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ALDH1A1P00352 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ALDH1A1P00352 AL845331.1-201ENST00000424978 1190 ntBASIC22.46■■□□□ 1.19
ALDH1A1P00352 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ALDH1A1P00352 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.46■■□□□ 1.19
ALDH1A1P00352 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ALDH1A1P00352 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.46■■□□□ 1.19
ALDH1A1P00352 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.45■■□□□ 1.19
ALDH1A1P00352 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 AP000347.1-202ENST00000435868 847 ntBASIC22.45■■□□□ 1.18
ALDH1A1P00352 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 AL160286.2-201ENST00000567150 934 ntBASIC22.45■■□□□ 1.18
ALDH1A1P00352 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 AC006538.3-201ENST00000612495 578 ntBASIC22.45■■□□□ 1.18
ALDH1A1P00352 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 AC244015.2-201ENST00000616358 1861 ntBASIC22.45■■□□□ 1.18
ALDH1A1P00352 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.45■■□□□ 1.18
ALDH1A1P00352 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ALDH1A1P00352 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ALDH1A1P00352 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ALDH1A1P00352 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ALDH1A1P00352 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.44■■□□□ 1.18
ALDH1A1P00352 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ALDH1A1P00352 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms