Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RTN3O95197 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.69■□□□□ 0.9
RTN3O95197 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.69■□□□□ 0.9
RTN3O95197 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.69■□□□□ 0.9
RTN3O95197 AC113410.3-201ENST00000623366 203 ntBASIC20.69■□□□□ 0.9
RTN3O95197 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.69■□□□□ 0.9
RTN3O95197 AL162377.1-201ENST00000618844 1793 ntBASIC20.69■□□□□ 0.9
RTN3O95197 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN3O95197 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RTN3O95197 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 AP001271.2-201ENST00000624018 1556 ntBASIC20.68■□□□□ 0.9
RTN3O95197 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.68■□□□□ 0.9
RTN3O95197 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN3O95197 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.68■□□□□ 0.9
RTN3O95197 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.68■□□□□ 0.9
RTN3O95197 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN3O95197 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.68■□□□□ 0.9
RTN3O95197 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN3O95197 AL353708.3-201ENST00000610272 989 ntBASIC20.68■□□□□ 0.9
RTN3O95197 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RTN3O95197 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 KRT17P2-201ENST00000300992 1314 ntBASIC20.68■□□□□ 0.9
RTN3O95197 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN3O95197 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN3O95197 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN3O95197 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN3O95197 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN3O95197 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.67■□□□□ 0.9
RTN3O95197 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 AP002982.1-201ENST00000492365 877 ntBASIC20.67■□□□□ 0.9
RTN3O95197 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.67■□□□□ 0.9
RTN3O95197 AC073195.1-201ENST00000607241 877 ntBASIC20.67■□□□□ 0.9
RTN3O95197 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTN3O95197 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN3O95197 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN3O95197 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.67■□□□□ 0.9
RTN3O95197 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN3O95197 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.66■□□□□ 0.9
RTN3O95197 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.66■□□□□ 0.9
RTN3O95197 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 KRT18P16-201ENST00000510337 1294 ntBASIC20.66■□□□□ 0.9
RTN3O95197 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTN3O95197 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.66■□□□□ 0.9
RTN3O95197 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.66■□□□□ 0.9
RTN3O95197 MIR4785-201ENST00000585005 73 ntBASIC20.66■□□□□ 0.9
RTN3O95197 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RTN3O95197 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN3O95197 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN3O95197 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTN3O95197 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN3O95197 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN3O95197 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN3O95197 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN3O95197 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.65■□□□□ 0.9
RTN3O95197 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RTN3O95197 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN3O95197 TSPY7P-201ENST00000431358 1114 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms