Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 MIR718-201ENST00000390190 70 ntBASIC20.67■□□□□ 0.9
BEST1O76090 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.67■□□□□ 0.9
BEST1O76090 TUBB8P6-201ENST00000436895 1288 ntBASIC20.67■□□□□ 0.9
BEST1O76090 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 SNORA78-201ENST00000459373 127 ntBASIC20.67■□□□□ 0.9
BEST1O76090 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.67■□□□□ 0.9
BEST1O76090 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BEST1O76090 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST1O76090 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.66■□□□□ 0.9
BEST1O76090 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.66■□□□□ 0.9
BEST1O76090 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
BEST1O76090 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
BEST1O76090 TSPY7P-201ENST00000431358 1114 ntBASIC20.66■□□□□ 0.9
BEST1O76090 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.66■□□□□ 0.9
BEST1O76090 C1QL1P1-201ENST00000568105 661 ntBASIC20.66■□□□□ 0.9
BEST1O76090 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BEST1O76090 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST1O76090 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BEST1O76090 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST1O76090 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 AL135905.2-201ENST00000584934 1404 ntBASIC20.65■□□□□ 0.9
BEST1O76090 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST1O76090 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST1O76090 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST1O76090 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST1O76090 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.65■□□□□ 0.9
BEST1O76090 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 AC125437.2-201ENST00000625180 2167 ntBASIC20.65■□□□□ 0.9
BEST1O76090 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BEST1O76090 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BEST1O76090 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BEST1O76090 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.64■□□□□ 0.9
BEST1O76090 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST1O76090 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.64■□□□□ 0.89
BEST1O76090 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
BEST1O76090 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST1O76090 MIR4497-201ENST00000583208 89 ntBASIC20.64■□□□□ 0.89
BEST1O76090 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.64■□□□□ 0.89
BEST1O76090 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST1O76090 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST1O76090 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST1O76090 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.64■□□□□ 0.89
BEST1O76090 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST1O76090 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BEST1O76090 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
BEST1O76090 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST1O76090 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
BEST1O76090 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BEST1O76090 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.63■□□□□ 0.89
BEST1O76090 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.63■□□□□ 0.89
BEST1O76090 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST1O76090 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.63■□□□□ 0.89
BEST1O76090 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.63■□□□□ 0.89
BEST1O76090 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.63■□□□□ 0.89
BEST1O76090 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.63■□□□□ 0.89
BEST1O76090 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms