Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
ZIC3O60481 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZIC3O60481 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ZIC3O60481 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZIC3O60481 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.71■□□□□ 0.43
ZIC3O60481 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.71■□□□□ 0.43
ZIC3O60481 AL353708.3-201ENST00000610272 989 ntBASIC17.71■□□□□ 0.43
ZIC3O60481 AL049637.2-201ENST00000641778 930 ntBASIC17.71■□□□□ 0.43
ZIC3O60481 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZIC3O60481 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.71■□□□□ 0.43
ZIC3O60481 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.71■□□□□ 0.42
ZIC3O60481 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZIC3O60481 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZIC3O60481 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZIC3O60481 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.7■□□□□ 0.42
ZIC3O60481 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ZIC3O60481 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.7■□□□□ 0.42
ZIC3O60481 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.7■□□□□ 0.42
ZIC3O60481 AL596275.1-201ENST00000423464 877 ntBASIC17.7■□□□□ 0.42
ZIC3O60481 AL353807.1-201ENST00000427475 662 ntBASIC17.7■□□□□ 0.42
ZIC3O60481 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.7■□□□□ 0.42
ZIC3O60481 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.7■□□□□ 0.42
ZIC3O60481 C1QL1P1-201ENST00000568105 661 ntBASIC17.7■□□□□ 0.42
ZIC3O60481 AP001412.1-201ENST00000608405 714 ntBASIC17.7■□□□□ 0.42
ZIC3O60481 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZIC3O60481 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZIC3O60481 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZIC3O60481 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZIC3O60481 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
ZIC3O60481 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 PCDHAC2-203ENST00000615316 3011 ntBASIC17.69■□□□□ 0.42
ZIC3O60481 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.69■□□□□ 0.42
ZIC3O60481 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.69■□□□□ 0.42
ZIC3O60481 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 AC113410.3-201ENST00000623366 203 ntBASIC17.69■□□□□ 0.42
ZIC3O60481 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.69■□□□□ 0.42
ZIC3O60481 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.69■□□□□ 0.42
ZIC3O60481 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZIC3O60481 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZIC3O60481 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ZIC3O60481 KRT8P8-201ENST00000434750 1448 ntBASIC17.68■□□□□ 0.42
ZIC3O60481 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
ZIC3O60481 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.68■□□□□ 0.42
ZIC3O60481 AC073195.1-201ENST00000607241 877 ntBASIC17.68■□□□□ 0.42
ZIC3O60481 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.68■□□□□ 0.42
ZIC3O60481 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.68■□□□□ 0.42
ZIC3O60481 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.68■□□□□ 0.42
ZIC3O60481 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZIC3O60481 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms