Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXN1O15353 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.49■■□□□ 1.35
FOXN1O15353 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXN1O15353 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXN1O15353 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
FOXN1O15353 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXN1O15353 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.48■■□□□ 1.35
FOXN1O15353 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXN1O15353 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXN1O15353 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXN1O15353 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.48■■□□□ 1.35
FOXN1O15353 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXN1O15353 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.48■■□□□ 1.35
FOXN1O15353 AC069148.1-201ENST00000608741 768 ntBASIC23.48■■□□□ 1.35
FOXN1O15353 CR769767.2-201ENST00000622735 460 ntBASIC23.48■■□□□ 1.35
FOXN1O15353 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.48■■□□□ 1.35
FOXN1O15353 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
FOXN1O15353 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
FOXN1O15353 FEM1AP1-201ENST00000431297 1995 ntBASIC23.47■■□□□ 1.35
FOXN1O15353 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.47■■□□□ 1.35
FOXN1O15353 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
FOXN1O15353 KSR1P1-201ENST00000446298 240 ntBASIC23.47■■□□□ 1.35
FOXN1O15353 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.47■■□□□ 1.35
FOXN1O15353 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
FOXN1O15353 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.47■■□□□ 1.35
FOXN1O15353 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
FOXN1O15353 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.47■■□□□ 1.35
FOXN1O15353 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
FOXN1O15353 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 KRT16P1-201ENST00000399124 1418 ntBASIC23.46■■□□□ 1.35
FOXN1O15353 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
FOXN1O15353 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.46■■□□□ 1.35
FOXN1O15353 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
FOXN1O15353 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.46■■□□□ 1.35
FOXN1O15353 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.46■■□□□ 1.35
FOXN1O15353 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.46■■□□□ 1.35
FOXN1O15353 AC116407.4-201ENST00000623319 1061 ntBASIC23.46■■□□□ 1.35
FOXN1O15353 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
FOXN1O15353 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
FOXN1O15353 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.45■■□□□ 1.35
FOXN1O15353 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
FOXN1O15353 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
FOXN1O15353 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
FOXN1O15353 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.45■■□□□ 1.34
FOXN1O15353 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
FOXN1O15353 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.45■■□□□ 1.34
FOXN1O15353 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
FOXN1O15353 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
FOXN1O15353 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.45■■□□□ 1.34
FOXN1O15353 TSPY21P-201ENST00000433481 731 ntBASIC23.45■■□□□ 1.34
FOXN1O15353 TSPY23P-201ENST00000440136 739 ntBASIC23.45■■□□□ 1.34
FOXN1O15353 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.45■■□□□ 1.34
FOXN1O15353 RN7SL510P-201ENST00000581311 263 ntBASIC23.45■■□□□ 1.34
FOXN1O15353 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.45■■□□□ 1.34
FOXN1O15353 AC004264.1-201ENST00000608354 794 ntBASIC23.45■■□□□ 1.34
FOXN1O15353 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
FOXN1O15353 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
FOXN1O15353 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.44■■□□□ 1.34
FOXN1O15353 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.44■■□□□ 1.34
FOXN1O15353 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 AC005332.1-201ENST00000577698 1310 ntBASIC23.44■■□□□ 1.34
FOXN1O15353 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
FOXN1O15353 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.44■■□□□ 1.34
FOXN1O15353 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.44■■□□□ 1.34
FOXN1O15353 AL138966.2-201ENST00000621997 464 ntBASIC23.44■■□□□ 1.34
FOXN1O15353 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
FOXN1O15353 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms