Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.51■□□□□ 0.55
CLIC1O00299 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC1O00299 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.51■□□□□ 0.55
CLIC1O00299 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.51■□□□□ 0.55
CLIC1O00299 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.51■□□□□ 0.55
CLIC1O00299 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC1O00299 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC1O00299 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC1O00299 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC1O00299 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLIC1O00299 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC1O00299 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.51■□□□□ 0.55
CLIC1O00299 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIC1O00299 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIC1O00299 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIC1O00299 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.5■□□□□ 0.55
CLIC1O00299 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLIC1O00299 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.5■□□□□ 0.55
CLIC1O00299 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIC1O00299 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLIC1O00299 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 AC026271.2-201ENST00000428091 497 ntBASIC18.49■□□□□ 0.55
CLIC1O00299 AC093787.1-201ENST00000450396 207 ntBASIC18.49■□□□□ 0.55
CLIC1O00299 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.49■□□□□ 0.55
CLIC1O00299 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CLIC1O00299 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIC1O00299 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.49■□□□□ 0.55
CLIC1O00299 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 LINC01465-201ENST00000408887 1940 ntBASIC18.49■□□□□ 0.55
CLIC1O00299 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLIC1O00299 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.49■□□□□ 0.55
CLIC1O00299 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIC1O00299 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIC1O00299 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIC1O00299 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 AC093503.3-201ENST00000624917 2352 ntBASIC18.48■□□□□ 0.55
CLIC1O00299 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLIC1O00299 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIC1O00299 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC1O00299 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLIC1O00299 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLIC1O00299 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLIC1O00299 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC1O00299 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLIC1O00299 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC1O00299 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.47■□□□□ 0.55
CLIC1O00299 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC1O00299 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC1O00299 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC1O00299 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms