Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF25A6NGN4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.39■□□□□ 0.54
PRAMEF25A6NGN4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF25A6NGN4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF25A6NGN4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 UNC93B5-201ENST00000530315 699 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 AC005829.2-201ENST00000571422 1056 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 AL031963.3-201ENST00000606441 850 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 KRT8P17-201ENST00000453110 1448 ntBASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF25A6NGN4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 HLA-G-202ENST00000376815 851 ntBASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 HLA-G-203ENST00000376818 1127 ntBASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 SOX15-203ENST00000570788 1093 ntBASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 AC004408.2-201ENST00000623613 2777 ntBASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF25A6NGN4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 Z82202.1-201ENST00000623446 1880 ntBASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 MIR4651-201ENST00000582622 73 ntBASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 KRT8P20-201ENST00000423953 1409 ntBASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF25A6NGN4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF25A6NGN4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF25A6NGN4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF25A6NGN4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms