Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 AC008687.6-201ENST00000596318 630 ntBASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC162PA2VCL2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 UNC93B4-201ENST00000505679 747 ntBASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 RNA5SP413-201ENST00000516373 109 ntBASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC162PA2VCL2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC162PA2VCL2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC162PA2VCL2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 AC008403.3-201ENST00000598924 454 ntBASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 AL121906.2-201ENST00000621597 723 ntBASIC19.6■□□□□ 0.73
CCDC162PA2VCL2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms