Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 KRT18P16-201ENST00000510337 1294 ntBASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 AL032819.2-201ENST00000624543 2162 ntBASIC20.52■□□□□ 0.88
TCRBV5S1A1TA0A578 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV5S1A1TA0A578 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TCRBV5S1A1TA0A578 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 AC026366.1-201ENST00000488803 879 ntBASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV5S1A1TA0A578 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 AC233263.1-201ENST00000578059 224 ntBASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV5S1A1TA0A578 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 MTDHP1-201ENST00000605323 784 ntBASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TCRBV5S1A1TA0A578 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 KRT8P8-201ENST00000434750 1448 ntBASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.48■□□□□ 0.87
TCRBV5S1A1TA0A578 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms