Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 KRT8P8-201ENST00000434750 1448 ntBASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 ABHD17AP1-201ENST00000358206 933 ntBASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 KRASP1-201ENST00000407852 552 ntBASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV5-4A0A0C4DH59 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 PRORSD1P-201ENST00000295112 541 ntBASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 TUBB8P6-201ENST00000436895 1288 ntBASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-4A0A0C4DH59 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 KRT18P29-201ENST00000397031 1267 ntBASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-4A0A0C4DH59 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 AC110285.5-201ENST00000611501 352 ntBASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-4A0A0C4DH59 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-4A0A0C4DH59 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-4A0A0C4DH59 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-4A0A0C4DH59 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms