Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-4A0A0B4J246 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TRAV8-4A0A0B4J246 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-4A0A0B4J246 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-4A0A0B4J246 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-4A0A0B4J246 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 AC087623.3-201ENST00000607047 1098 ntBASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-4A0A0B4J246 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 AP000974.1-201ENST00000623909 2387 ntBASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-4A0A0B4J246 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms