Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MMP23A-201ENST00000234610 1017 ntBASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 UNC93B2-201ENST00000285383 730 ntBASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 C1QL1P1-201ENST00000568105 661 ntBASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV10A0A0B4J240 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 AL031985.4-201ENST00000642138 673 ntBASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV10A0A0B4J240 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 KRT18P16-201ENST00000510337 1294 ntBASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV10A0A0B4J240 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
TRAV10A0A0B4J240 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms