Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC114786.1-201ENST00000512892 1415 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 RN7SKP59-201ENST00000410520 314 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AL357752.1-201ENST00000412817 349 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC017078.1-201ENST00000416146 368 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 MTND2P3-201ENST00000452458 470 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC021678.3-201ENST00000517893 476 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 MIR1269B-201ENST00000580405 75 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AL133445.2-201ENST00000611191 527 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC020763.5-201ENST00000623298 430 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 THAP12P9-201ENST00000503971 2360 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 AC011933.2-201ENST00000578539 2790 ntBASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.45□□□□□ -1.38
HDAC6Q9UBN7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL159987.1-201ENST00000347911 293 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 MIR105-2-201ENST00000385083 81 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 RMRPP5-201ENST00000411156 267 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL354868.1-201ENST00000417077 482 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 TAAR4P-201ENST00000454843 1039 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 PFN1P6-201ENST00000476786 399 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 UBA52P7-201ENST00000486088 380 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 BX510359.5-201ENST00000515651 304 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC139365.2-201ENST00000517972 253 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AL359513.1-201ENST00000614364 557 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC103798.2-201ENST00000624292 632 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC120036.2-201ENST00000509729 1474 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC235565.1-201ENST00000456962 1325 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AP005435.3-201ENST00000531260 3198 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 AC125336.1-201ENST00000508893 2827 ntBASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC6Q9UBN7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 DNM1P47-203ENST00000571780 12667 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC109446.4-201ENST00000623235 2755 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 Y_RNA.62-201ENST00000362840 99 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 RNU6-171P-201ENST00000384354 107 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms