Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 ZNF619P1-201ENST00000446539 752 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC093270.2-201ENST00000486157 792 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 DUTP7-201ENST00000507982 486 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC019227.1-201ENST00000526902 510 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC084373.1-201ENST00000603311 235 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC144521.1-201ENST00000607148 956 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC004241.3-201ENST00000611728 517 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC012653.2-201ENST00000621880 420 ntBASIC8.22□□□□□ -1.09
USP35Q9P2H5 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
USP35Q9P2H5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USP35Q9P2H5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.21□□□□□ -1.09
USP35Q9P2H5 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 OR13C1P-202ENST00000641378 2919 ntBASIC8.21□□□□□ -1.09
USP35Q9P2H5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 ZNF90P1-201ENST00000480493 1951 ntBASIC8.21□□□□□ -1.09
USP35Q9P2H5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.21□□□□□ -1.09
USP35Q9P2H5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.21□□□□□ -1.09
USP35Q9P2H5 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.21□□□□□ -1.09
USP35Q9P2H5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
USP35Q9P2H5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 RNU6-792P-201ENST00000363490 107 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 RNA5SP132-201ENST00000364725 118 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 MT-TP-201ENST00000387461 68 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 TAF9BP2-201ENST00000400856 499 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 SPTLC1P2-201ENST00000407089 121 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 RN7SL466P-201ENST00000497546 295 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC106800.3-201ENST00000511389 308 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 IGHV3-57-201ENST00000520143 280 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AP000648.1-201ENST00000529682 397 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 PCNAP4-201ENST00000532690 730 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC106785.3-201ENST00000564064 847 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 MIR1269B-201ENST00000580405 75 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC015911.5-201ENST00000587076 451 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AL953862.2-201ENST00000603089 820 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AL031601.1-201ENST00000605702 394 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC079395.2-201ENST00000610982 737 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 AC109780.1-201ENST00000451768 1344 ntBASIC8.21□□□□□ -1.1
USP35Q9P2H5 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.21□□□□□ -1.1
USP35Q9P2H5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USP35Q9P2H5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC092070.2-203ENST00000598377 3644 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 C4BPAP1-201ENST00000415474 1893 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
USP35Q9P2H5 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 MIR375-201ENST00000362103 64 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 RN7SKP162-201ENST00000363605 345 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 U3.7-201ENST00000363668 216 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC093155.2-201ENST00000420734 937 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 GAPDHP58-201ENST00000438477 1006 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 NPM1P29-201ENST00000483112 803 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC091965.3-201ENST00000506236 208 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC010343.2-201ENST00000510162 224 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 BTG4P1-201ENST00000510421 183 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 IGHV3-63-201ENST00000518422 341 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.2□□□□□ -1.1
USP35Q9P2H5 AP005639.1-201ENST00000526939 192 ntBASIC8.2□□□□□ -1.1
USP35Q9P2H5 AC004923.2-201ENST00000529649 369 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms