Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC105402.2-201ENST00000438503 358 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC093166.1-201ENST00000442243 330 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC005297.2-201ENST00000450430 606 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RN7SL870P-201ENST00000460111 296 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RPL7P39-201ENST00000481157 744 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC113352.1-201ENST00000513196 666 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 LRRC34P2-201ENST00000514850 553 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 SUB1P2-201ENST00000556401 297 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC090607.2-201ENST00000560331 695 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 SMCO4P1-201ENST00000592909 177 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 HCG18-247ENST00000602698 573 ntTSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC073091.2-201ENST00000603205 907 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AL391646.1-201ENST00000603860 190 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC011416.3-201ENST00000603971 355 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 U1.40-201ENST00000610976 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 CSH1-206ENST00000610991 580 ntTSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 U1.27-201ENST00000615842 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AP003108.5-201ENST00000623008 895 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC012254.5-201ENST00000623573 478 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 TEX51-209ENST00000636457 811 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 OR7E25P-202ENST00000641088 5937 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 FBXO47-201ENST00000378079 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC017104.4-201ENST00000636283 1592 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 RNU6-343P-201ENST00000364709 104 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC108734.1-201ENST00000439549 399 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 snoU13.7-201ENST00000459220 104 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 PLGLA-201ENST00000465668 449 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 RN7SL809P-201ENST00000482040 297 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 RPL36AP51-201ENST00000487216 318 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 SNORA76.1-201ENST00000516313 135 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 EEF1A1P17-201ENST00000547505 1275 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 OR11K1P-201ENST00000558299 904 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC024451.4-201ENST00000602578 752 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC016999.2-201ENST00000614692 556 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 MIR8078-201ENST00000619811 84 ntBASIC9.68□□□□□ -0.86
RTN4Q9NQC3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC9.68□□□□□ -0.86
RTN4Q9NQC3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 AC005332.5-201ENST00000591222 2919 ntBASIC9.67□□□□□ -0.86
RTN4Q9NQC3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC9.67□□□□□ -0.86
RTN4Q9NQC3 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms