Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.63
KIAA1549Q9HCM3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 RNU4-34P-201ENST00000410431 124 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 FKBP1AP1-201ENST00000594588 318 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC126915.2-201ENST00000610957 190 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC005618.4-201ENST00000625053 554 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC000095.2-202ENST00000637415 154 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 CASC19-222ENST00000641321 1173 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AL592429.1-201ENST00000403909 1473 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC105399.1-202ENST00000447303 205 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 RN7SL814P-201ENST00000487715 300 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC025857.2-201ENST00000602711 238 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC069307.1-201ENST00000602820 447 ntBASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KIAA1549Q9HCM3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AL163193.1-201ENST00000444895 788 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 ATP5LP5-201ENST00000483050 299 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 RN7SKP99-201ENST00000517028 307 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AP006245.2-201ENST00000522004 300 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 AC003973.3-201ENST00000624863 2822 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 MSL3P1-202ENST00000440028 1468 ntBASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KIAA1549Q9HCM3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 RNU1-106P-201ENST00000384382 164 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 DUTP5-201ENST00000406790 469 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 NPM1P22-201ENST00000427761 952 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 MIR4420-201ENST00000583944 77 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms