Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 AC007842.1-201ENST00000597336 2039 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 MRE11P1-201ENST00000464884 2127 ntBASIC6.01□□□□□ -1.45
EBF3Q9H4W6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
EBF3Q9H4W6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 AL355488.2-201ENST00000609909 2850 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
EBF3Q9H4W6 SRRM1P3-201ENST00000426911 2678 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6□□□□□ -1.45
EBF3Q9H4W6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 Y_RNA.110-201ENST00000363220 99 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6□□□□□ -1.45
EBF3Q9H4W6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6□□□□□ -1.45
EBF3Q9H4W6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 FMO7P-201ENST00000436045 768 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 CYCSP51-201ENST00000443545 318 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AC005297.1-201ENST00000444765 862 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6□□□□□ -1.45
EBF3Q9H4W6 AL133445.1-201ENST00000467051 452 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 RN7SL184P-201ENST00000488308 297 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6□□□□□ -1.45
EBF3Q9H4W6 AC026407.1-201ENST00000518369 204 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 AC023158.1-201ENST00000561632 1025 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AC093524.1-201ENST00000564266 1094 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6□□□□□ -1.45
EBF3Q9H4W6 MIR1273E-201ENST00000581165 102 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 KATNBL1P1-201ENST00000605192 748 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AC138473.1-201ENST00000605717 526 ntBASIC6□□□□□ -1.45
EBF3Q9H4W6 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
EBF3Q9H4W6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6□□□□□ -1.45
EBF3Q9H4W6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
EBF3Q9H4W6 BX284613.1-201ENST00000452221 1641 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 RN7SKP151-201ENST00000410230 316 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 RN7SKP59-201ENST00000410520 314 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 RMRPP5-201ENST00000411156 267 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AL354766.1-201ENST00000423396 542 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AL390879.2-203ENST00000426943 1121 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC012075.1-201ENST00000436549 580 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 XKRYP6-201ENST00000440468 1116 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 XKRYP3-201ENST00000442113 1116 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AL163193.1-201ENST00000444895 788 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 RPL7L1P3-201ENST00000455249 689 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 PFN1P6-201ENST00000476786 399 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 RPL32P33-201ENST00000487023 394 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 SUMO2P15-201ENST00000604285 278 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC063944.3-201ENST00000609969 533 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms