Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ADAM5-202ENST00000399789 1942 ntBASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO3Q9BXY4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RNA5SP241-201ENST00000391326 114 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 NPM1P37-201ENST00000403105 874 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 OR4K12P-201ENST00000406538 961 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AL133173.1-201ENST00000423458 397 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC017019.1-201ENST00000426129 261 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 BRWD1P3-201ENST00000428816 390 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RPL7AP49-201ENST00000429522 581 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AL591438.1-201ENST00000433508 581 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 FMO7P-201ENST00000436045 768 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RPL23AP19-201ENST00000436229 369 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC092106.1-201ENST00000444291 373 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 ACA64.1-201ENST00000459171 127 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RN7SL72P-201ENST00000460697 269 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RPS26P24-201ENST00000497656 331 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 IMPA1P1-201ENST00000510718 842 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AC027216.1-201ENST00000577726 685 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 RN7SL290P-201ENST00000578661 300 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 MTCO1P1-201ENST00000624263 1081 ntBASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO3Q9BXY4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC125336.1-201ENST00000508893 2827 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC092681.1-201ENST00000297369 291 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 RN7SKP69-201ENST00000365390 305 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 SNORD56.6-201ENST00000384569 71 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL031985.1-201ENST00000392713 418 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 RN7SKP229-201ENST00000410465 302 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL136231.1-201ENST00000429407 730 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 NOP56P2-201ENST00000447491 769 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC058823.1-201ENST00000485315 474 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC016559.2-201ENST00000510759 359 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 MTATP6P1-201ENST00000514057 681 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AL390318.1-201ENST00000624564 687 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC004656.1-201ENST00000568479 4951 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC005261.6-201ENST00000623072 1387 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms