Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TMSB4XP2-201ENST00000335179 210 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 RNU6-1257P-201ENST00000384625 110 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC092642.1-201ENST00000392417 425 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 BX119321.1-201ENST00000428912 797 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AC079807.1-201ENST00000429993 481 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC011242.1-201ENST00000433596 1158 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AMYP1-201ENST00000440059 1023 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AL663074.2-201ENST00000440621 479 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 ATP5LP2-201ENST00000440646 311 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 CST12P-201ENST00000457644 362 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AL603882.1-201ENST00000463059 681 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 TRBV5-2-201ENST00000489095 273 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC034244.2-201ENST00000514668 858 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AC011853.1-201ENST00000518911 454 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC006512.2-201ENST00000543250 486 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.57□□□□□ -1.36
HPS3Q969F9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.57□□□□□ -1.36
HPS3Q969F9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC002519.2-203ENST00000567043 837 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AL359715.3-201ENST00000569267 2123 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 MTND1P8-201ENST00000571424 950 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 TXNP4-201ENST00000575018 310 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 MTCO2P22-201ENST00000603246 681 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 RNU6-84P-201ENST00000607737 102 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 AP001033.2-201ENST00000609701 1003 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.57□□□□□ -1.36
HPS3Q969F9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HPS3Q969F9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.57□□□□□ -1.36
HPS3Q969F9 THAP12P9-201ENST00000503971 2360 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HPS3Q969F9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 LYARP1-201ENST00000436977 1501 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AL121977.1-201ENST00000401636 979 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AL158827.1-201ENST00000416300 391 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 MTCYBP7-201ENST00000419540 1134 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 OR5W1P-201ENST00000423705 938 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AC099677.3-201ENST00000427081 395 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AL445928.1-201ENST00000435545 222 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AL390879.1-201ENST00000439143 386 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 TRIM60P16-201ENST00000444048 694 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AL157777.1-201ENST00000468100 304 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 RBBP4P1-201ENST00000502424 1276 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.56□□□□□ -1.36
HPS3Q969F9 RNU5A-7P-201ENST00000515979 116 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 MIR2117-201ENST00000516780 80 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.56□□□□□ -1.36
HPS3Q969F9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 CYCSP38-201ENST00000559840 322 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 GARSP1-201ENST00000570895 719 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 DHFRP1-201ENST00000579682 559 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
HPS3Q969F9 MIR6071-201ENST00000616741 78 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 AL355974.3-201ENST00000617383 467 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.56□□□□□ -1.36
HPS3Q969F9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HPS3Q969F9 RBPJP7-201ENST00000442803 1447 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 RBPJP5-201ENST00000449433 1447 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms