Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC027026.1-201ENST00000532323 742 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC103855.4-201ENST00000533158 265 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC011840.5-201ENST00000582125 771 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 MIR4642-201ENST00000583943 82 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC022239.4-201ENST00000602626 504 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL137190.1-201ENST00000603288 282 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 SNRPGP17-201ENST00000603780 214 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 PRELID3BP8-201ENST00000604148 295 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 uc_338.5-201ENST00000611839 155 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC092650.2-201ENST00000619984 902 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC091905.1-201ENST00000624400 311 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AP001350.1-201ENST00000601906 1524 ntBASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SCUBE3Q8IX30 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC006058.1-201ENST00000568686 5067 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC051619.3-201ENST00000560646 2426 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 RNA5SP483-201ENST00000363431 118 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC074375.1-201ENST00000372993 192 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 Y_RNA.384-201ENST00000383909 102 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 RNA5SP18-201ENST00000390935 121 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 RPL35AP24-201ENST00000413846 330 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL353678.1-201ENST00000422735 741 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 GAPDHP51-201ENST00000426454 1000 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 MTND6P13-201ENST00000443510 523 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC090589.1-201ENST00000473109 362 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL928654.1-201ENST00000476081 354 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC122714.1-201ENST00000502510 459 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 CDC42P3-201ENST00000518493 633 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC083923.1-201ENST00000523708 376 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC009729.1-201ENST00000548873 1133 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC004817.2-201ENST00000561794 651 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 OR6M2P-202ENST00000641780 2063 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 AL512662.1-201ENST00000624850 2251 ntBASIC8.1□□□□□ -1.11
SCUBE3Q8IX30 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms