Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC104837.1-201ENST00000444644 1587 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 RNU4-51P-201ENST00000364206 140 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL590762.1-201ENST00000391782 432 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 ARL4AP5-201ENST00000404372 599 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 RN7SKP142-201ENST00000411236 328 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC098592.1-201ENST00000419352 333 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 DUTP4-201ENST00000424782 475 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC018804.1-201ENST00000430381 618 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 GAPDHP19-201ENST00000431768 1005 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 MYL6P3-201ENST00000436904 432 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL020997.1-201ENST00000446554 349 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 IGBP1P3-201ENST00000447449 1000 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 EEF1B2P3-201ENST00000447718 678 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC018638.3-201ENST00000461273 132 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 UOX-201ENST00000471089 899 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 RPS4XP23-201ENST00000487801 237 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 RPS6P4-201ENST00000494693 758 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC015864.1-201ENST00000496512 544 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 FTH1P8-201ENST00000498161 514 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC117522.1-201ENST00000509821 380 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 MTCYBP19-201ENST00000517463 1124 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC087465.1-201ENST00000560574 245 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC022662.1-201ENST00000580252 331 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC090616.5-202ENST00000582111 297 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 FGF7P1-201ENST00000582820 288 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC011447.2-201ENST00000592921 283 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL137000.1-201ENST00000610528 1244 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC004223.4-201ENST00000612426 332 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC010678.1-201ENST00000614118 713 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AC112204.3-201ENST00000623822 332 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL357140.4-201ENST00000636827 412 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 CDY19P-201ENST00000411668 1613 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 CDY18P-201ENST00000438294 1609 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 AC016716.1-201ENST00000265882 708 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF43Q68DV7 AL353625.1-202ENST00000366273 571 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 RNA5SP122-201ENST00000384457 108 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 RNA5SP176-201ENST00000390956 110 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 RANP4-201ENST00000413361 655 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 AC245054.1-201ENST00000420944 258 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 PTPN2P1-201ENST00000423212 1072 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 AC104651.1-201ENST00000427559 735 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF43Q68DV7 YWHAZP7-201ENST00000436906 631 ntBASIC7.17□□□□□ -1.26
RNF43Q68DV7 UBE2V1P8-201ENST00000437166 265 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms