Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC087565.3-203ENST00000641018 837 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PKNOX1P55347 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.37□□□□□ -1.55
PKNOX1P55347 NEPNP-201ENST00000404786 1371 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.37□□□□□ -1.55
PKNOX1P55347 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PKNOX1P55347 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 CDY11P-201ENST00000447168 1651 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 AC100757.1-201ENST00000616872 1835 ntBASIC5.37□□□□□ -1.55
PKNOX1P55347 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PKNOX1P55347 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.36□□□□□ -1.55
PKNOX1P55347 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PKNOX1P55347 U3.7-201ENST00000363668 216 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 RNA5SP241-201ENST00000391326 114 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 RPS3AP2-201ENST00000407190 754 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC127526.2-201ENST00000426436 775 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC092106.1-201ENST00000444291 373 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 RPS23P6-201ENST00000466136 431 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.36□□□□□ -1.55
PKNOX1P55347 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.36□□□□□ -1.55
PKNOX1P55347 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 AC114781.3-201ENST00000512083 142 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC011853.1-201ENST00000518911 454 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC092709.1-201ENST00000521355 1045 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.36□□□□□ -1.55
PKNOX1P55347 AC068305.2-201ENST00000550567 1205 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.36□□□□□ -1.55
PKNOX1P55347 AC015802.2-201ENST00000589690 189 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PKNOX1P55347 AL078621.3-201ENST00000623707 2042 ntBASIC5.36□□□□□ -1.55
PKNOX1P55347 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
PKNOX1P55347 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
PKNOX1P55347 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
PKNOX1P55347 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PKNOX1P55347 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
PKNOX1P55347 PROS2P-201ENST00000474651 1951 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 AC003985.2-201ENST00000562268 1669 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PKNOX1P55347 MIR375-201ENST00000362103 64 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 RNA5SP131-201ENST00000365452 119 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PKNOX1P55347 SNORA48.4-201ENST00000391089 134 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 RMRPP5-201ENST00000411156 267 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.35□□□□□ -1.55
PKNOX1P55347 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AC113412.1-201ENST00000425840 504 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 AC016772.1-201ENST00000444170 1261 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.35□□□□□ -1.55
PKNOX1P55347 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.35□□□□□ -1.55
PKNOX1P55347 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.35□□□□□ -1.55
PKNOX1P55347 IGBP1P1-201ENST00000554337 1009 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AC092121.1-201ENST00000569452 202 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.35□□□□□ -1.55
PKNOX1P55347 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.35□□□□□ -1.55
PKNOX1P55347 AC073869.7-201ENST00000640874 297 ntBASIC5.35□□□□□ -1.55
PKNOX1P55347 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.35□□□□□ -1.55
PKNOX1P55347 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PKNOX1P55347 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms