Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL023583.1-201ENST00000607518 1143 ntBASIC4.89□□□□□ -1.63
CDX1P47902 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CDX1P47902 AC021106.3-201ENST00000623925 531 ntBASIC4.89□□□□□ -1.63
CDX1P47902 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.89□□□□□ -1.63
CDX1P47902 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.89□□□□□ -1.63
CDX1P47902 AC019072.1-201ENST00000604535 1551 ntBASIC4.89□□□□□ -1.63
CDX1P47902 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDX1P47902 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDX1P47902 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDX1P47902 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.89□□□□□ -1.63
CDX1P47902 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDX1P47902 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDX1P47902 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CDX1P47902 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CDX1P47902 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AC092376.2-201ENST00000622621 4116 ntBASIC4.88□□□□□ -1.63
CDX1P47902 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 HSPD1P9-201ENST00000420325 1636 ntBASIC4.88□□□□□ -1.63
CDX1P47902 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 GCNT1P4-201ENST00000404096 329 ntBASIC4.88□□□□□ -1.63
CDX1P47902 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 CYP4F30P-202ENST00000420048 405 ntBASIC4.88□□□□□ -1.63
CDX1P47902 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 PSMD10P2-201ENST00000432890 672 ntBASIC4.88□□□□□ -1.63
CDX1P47902 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 PCNPP2-201ENST00000441651 455 ntBASIC4.88□□□□□ -1.63
CDX1P47902 VPS25P1-201ENST00000455691 508 ntBASIC4.88□□□□□ -1.63
CDX1P47902 AL133244.1-201ENST00000456007 258 ntBASIC4.88□□□□□ -1.63
CDX1P47902 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CDX1P47902 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 PFN1P8-201ENST00000497012 543 ntBASIC4.88□□□□□ -1.63
CDX1P47902 SNX18P24-201ENST00000505249 671 ntBASIC4.88□□□□□ -1.63
CDX1P47902 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 OR8X1P-201ENST00000534542 869 ntBASIC4.88□□□□□ -1.63
CDX1P47902 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.88□□□□□ -1.63
CDX1P47902 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.88□□□□□ -1.63
CDX1P47902 AC027176.2-201ENST00000559166 746 ntBASIC4.88□□□□□ -1.63
CDX1P47902 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.88□□□□□ -1.63
CDX1P47902 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.88□□□□□ -1.63
CDX1P47902 AP001823.1-201ENST00000604056 1003 ntBASIC4.88□□□□□ -1.63
CDX1P47902 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AL008723.3-201ENST00000608926 449 ntBASIC4.88□□□□□ -1.63
CDX1P47902 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AC022726.2-201ENST00000634673 547 ntBASIC4.88□□□□□ -1.63
CDX1P47902 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
CDX1P47902 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDX1P47902 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AL034546.1-201ENST00000623740 3693 ntBASIC4.88□□□□□ -1.63
CDX1P47902 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
CDX1P47902 AC104966.1-201ENST00000467010 1464 ntBASIC4.88□□□□□ -1.63
CDX1P47902 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDX1P47902 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CDX1P47902 AL606537.1-201ENST00000607258 2011 ntBASIC4.87□□□□□ -1.63
CDX1P47902 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.87□□□□□ -1.63
CDX1P47902 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDX1P47902 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CDX1P47902 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CDX1P47902 RN7SKP74-201ENST00000362849 309 ntBASIC4.87□□□□□ -1.63
CDX1P47902 RNA5SP346-201ENST00000363541 121 ntBASIC4.87□□□□□ -1.63
CDX1P47902 U3.43-201ENST00000410734 213 ntBASIC4.87□□□□□ -1.63
CDX1P47902 RN7SKP121-201ENST00000410842 305 ntBASIC4.87□□□□□ -1.63
CDX1P47902 RNU2-72P-201ENST00000411175 163 ntBASIC4.87□□□□□ -1.63
CDX1P47902 AC019070.1-201ENST00000415008 1024 ntBASIC4.87□□□□□ -1.63
CDX1P47902 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.87□□□□□ -1.63
CDX1P47902 AC073464.3-201ENST00000422564 712 ntBASIC4.87□□□□□ -1.63
CDX1P47902 HSPE1P16-201ENST00000426640 348 ntBASIC4.87□□□□□ -1.63
CDX1P47902 GAPDHP34-201ENST00000432112 823 ntBASIC4.87□□□□□ -1.63
CDX1P47902 AC069154.1-201ENST00000432914 542 ntBASIC4.87□□□□□ -1.63
CDX1P47902 AC007679.3-201ENST00000434035 414 ntBASIC4.87□□□□□ -1.63
CDX1P47902 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.87□□□□□ -1.63
CDX1P47902 RPS3AP38-201ENST00000435889 763 ntBASIC4.87□□□□□ -1.63
CDX1P47902 CACYBPP1-201ENST00000438592 684 ntBASIC4.87□□□□□ -1.63
CDX1P47902 PPIAP10-201ENST00000438675 458 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms