Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HADHAP40939 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 LYARP1-201ENST00000436977 1501 ntBASIC5.91□□□□□ -1.46
HADHAP40939 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HADHAP40939 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HADHAP40939 RNA5SP105-201ENST00000391123 113 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.91□□□□□ -1.46
HADHAP40939 AL389925.1-201ENST00000432257 728 ntBASIC5.91□□□□□ -1.46
HADHAP40939 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.91□□□□□ -1.46
HADHAP40939 RNU1-88P-201ENST00000459274 128 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC099521.1-201ENST00000482557 334 ntBASIC5.91□□□□□ -1.46
HADHAP40939 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.91□□□□□ -1.46
HADHAP40939 WBP1LP3-201ENST00000523033 208 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.91□□□□□ -1.46
HADHAP40939 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.91□□□□□ -1.46
HADHAP40939 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 CYCSP38-201ENST00000559840 322 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.91□□□□□ -1.46
HADHAP40939 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.91□□□□□ -1.46
HADHAP40939 AL513327.3-201ENST00000602618 469 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC108865.2-201ENST00000606881 432 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC007620.3-201ENST00000608131 497 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC108673.3-201ENST00000609183 335 ntBASIC5.91□□□□□ -1.46
HADHAP40939 MIR6793-201ENST00000612376 63 ntBASIC5.91□□□□□ -1.46
HADHAP40939 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.91□□□□□ -1.46
HADHAP40939 AC003001.2-201ENST00000616294 831 ntBASIC5.91□□□□□ -1.46
HADHAP40939 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.91□□□□□ -1.46
HADHAP40939 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 AC125336.1-201ENST00000508893 2827 ntBASIC5.91□□□□□ -1.46
HADHAP40939 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HADHAP40939 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HADHAP40939 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HADHAP40939 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HADHAP40939 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HADHAP40939 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.9□□□□□ -1.46
HADHAP40939 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 AC023490.2-201ENST00000359859 470 ntBASIC5.9□□□□□ -1.46
HADHAP40939 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 GABARAPL3-201ENST00000412799 354 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 RNF19BPX-201ENST00000426224 625 ntBASIC5.9□□□□□ -1.46
HADHAP40939 VN1R21P-201ENST00000426703 765 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 RBMY2TP-201ENST00000451162 947 ntBASIC5.9□□□□□ -1.46
HADHAP40939 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.9□□□□□ -1.46
HADHAP40939 RN7SL284P-201ENST00000498823 275 ntBASIC5.9□□□□□ -1.46
HADHAP40939 GAPDHP71-201ENST00000511530 1003 ntBASIC5.9□□□□□ -1.46
HADHAP40939 MTND2P31-201ENST00000512602 616 ntBASIC5.9□□□□□ -1.46
HADHAP40939 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.9□□□□□ -1.46
HADHAP40939 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HADHAP40939 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 AC084824.2-201ENST00000548906 345 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC126615.2-201ENST00000553003 515 ntBASIC5.9□□□□□ -1.46
HADHAP40939 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 AL731537.2-201ENST00000561565 951 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.9□□□□□ -1.46
HADHAP40939 TXNP4-201ENST00000575018 310 ntBASIC5.9□□□□□ -1.46
HADHAP40939 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HADHAP40939 MIR6809-201ENST00000612189 116 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC024884.1-201ENST00000620583 399 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AC129778.1-202ENST00000623812 261 ntBASIC5.9□□□□□ -1.46
HADHAP40939 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.9□□□□□ -1.46
HADHAP40939 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.9□□□□□ -1.46
HADHAP40939 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.9□□□□□ -1.46
HADHAP40939 AL591379.1-207ENST00000635982 261 ntBASIC5.9□□□□□ -1.46
HADHAP40939 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.9□□□□□ -1.46
HADHAP40939 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HADHAP40939 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HADHAP40939 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.9□□□□□ -1.47
HADHAP40939 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms