Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.46□□□□□ -1.37
SCN4AP35499 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.46□□□□□ -1.37
SCN4AP35499 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.46□□□□□ -1.37
SCN4AP35499 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.46□□□□□ -1.37
SCN4AP35499 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SCN4AP35499 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.46□□□□□ -1.37
SCN4AP35499 AC005341.1-201ENST00000571086 708 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 AC136624.4-201ENST00000573044 370 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 AC068790.7-201ENST00000602347 528 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.46□□□□□ -1.37
SCN4AP35499 AL161616.1-201ENST00000611867 286 ntBASIC6.46□□□□□ -1.37
SCN4AP35499 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
SCN4AP35499 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
SCN4AP35499 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN4AP35499 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN4AP35499 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
SCN4AP35499 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SCN4AP35499 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN4AP35499 NANOGP9-201ENST00000439890 892 ntBASIC6.46□□□□□ -1.38
SCN4AP35499 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN4AP35499 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.46□□□□□ -1.38
SCN4AP35499 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.46□□□□□ -1.38
SCN4AP35499 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.46□□□□□ -1.38
SCN4AP35499 AC016717.3-201ENST00000624730 554 ntBASIC6.46□□□□□ -1.38
SCN4AP35499 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCN4AP35499 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SCN4AP35499 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN4AP35499 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
SCN4AP35499 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN4AP35499 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN4AP35499 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN4AP35499 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN4AP35499 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
SCN4AP35499 RNU1-146P-201ENST00000364015 165 ntBASIC6.45□□□□□ -1.38
SCN4AP35499 RN7SKP151-201ENST00000410230 316 ntBASIC6.45□□□□□ -1.38
SCN4AP35499 EI24P4-201ENST00000423683 1078 ntBASIC6.45□□□□□ -1.38
SCN4AP35499 AL161747.1-201ENST00000480068 358 ntBASIC6.45□□□□□ -1.38
SCN4AP35499 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN4AP35499 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.45□□□□□ -1.38
SCN4AP35499 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.45□□□□□ -1.38
SCN4AP35499 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 AC114876.1-201ENST00000490962 1366 ntBASIC6.45□□□□□ -1.38
SCN4AP35499 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN4AP35499 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCN4AP35499 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SCN4AP35499 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 TMEM183AP1-205ENST00000432739 290 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN4AP35499 AC009127.1-201ENST00000467090 155 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 RPS7P6-201ENST00000485777 579 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 PMS2P3-207ENST00000529061 717 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN4AP35499 RNF138P2-201ENST00000603490 592 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SCN4AP35499 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 AC132825.1-201ENST00000463573 2247 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 AC092747.4-201ENST00000620519 1861 ntBASIC6.44□□□□□ -1.38
SCN4AP35499 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN4AP35499 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN4AP35499 SNORA70.2-201ENST00000364506 135 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 AL354868.1-201ENST00000417077 482 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN4AP35499 AC068287.1-201ENST00000430283 295 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 RN7SL354P-201ENST00000469282 294 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 RPL5P12-201ENST00000477071 851 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 AC026979.1-201ENST00000492525 396 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN4AP35499 BTF3P13-201ENST00000513224 490 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN4AP35499 AC007346.2-201ENST00000564816 892 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 DHFRP1-201ENST00000579682 559 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.43□□□□□ -1.38
SCN4AP35499 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SCN4AP35499 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN4AP35499 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN4AP35499 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN4AP35499 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms