Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HOXC13P31276 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 RN7SKP59-201ENST00000410520 314 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 OR6E1P-201ENST00000414424 923 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 OR51A6P-201ENST00000418680 1004 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 GAPDHP58-201ENST00000438477 1006 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AL390119.1-201ENST00000440329 312 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AC015983.1-201ENST00000441577 373 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.04□□□□□ -1.44
HOXC13P31276 OTX2P1-201ENST00000450956 354 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AC004129.2-201ENST00000457229 287 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 RN7SL72P-201ENST00000460697 269 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 GAPDHP71-201ENST00000511530 1003 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC13P31276 RNA5SP92-201ENST00000516437 110 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC13P31276 AL163952.1-202ENST00000569625 600 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 AC024940.4-201ENST00000605507 246 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 MIR6730-201ENST00000622213 67 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC13P31276 OR11H2-202ENST00000641517 1085 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.04□□□□□ -1.44
HOXC13P31276 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HOXC13P31276 PDZK1P1-202ENST00000425209 1350 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 SAMM50P1-201ENST00000455403 1399 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 MRRFP1-201ENST00000435941 1675 ntBASIC6.04□□□□□ -1.44
HOXC13P31276 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HOXC13P31276 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
HOXC13P31276 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HOXC13P31276 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HOXC13P31276 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 FBXL21-201ENST00000297158 1305 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HOXC13P31276 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HOXC13P31276 U3.7-201ENST00000363668 216 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 MTND4LP13-201ENST00000425022 298 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 HMGB3P24-201ENST00000433260 622 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 H3F3BP1-201ENST00000440551 403 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC13P31276 RPS17P15-201ENST00000475609 349 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 RN7SL727P-201ENST00000482164 296 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC13P31276 AC098799.1-201ENST00000504752 800 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 RN7SKP67-201ENST00000515905 235 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 IGLV2-28-201ENST00000520681 304 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.03□□□□□ -1.44
HOXC13P31276 DPPA2P4-201ENST00000563717 878 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.03□□□□□ -1.44
HOXC13P31276 SUMO2P15-201ENST00000604285 278 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.03□□□□□ -1.44
HOXC13P31276 AL136295.6-201ENST00000610486 658 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 MIR6798-201ENST00000612887 67 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 AP001005.3-201ENST00000622049 129 ntBASIC6.03□□□□□ -1.44
HOXC13P31276 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC13P31276 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HOXC13P31276 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
HOXC13P31276 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC13P31276 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.03□□□□□ -1.44
HOXC13P31276 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HOXC13P31276 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.02□□□□□ -1.44
HOXC13P31276 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC13P31276 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC13P31276 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC13P31276 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms