Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC8P31273 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXC8P31273 RPSAP73-201ENST00000614820 330 ntBASIC6.12□□□□□ -1.43
HOXC8P31273 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC8P31273 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC8P31273 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXC8P31273 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HOXC8P31273 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC8P31273 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HOXC8P31273 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC8P31273 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC8P31273 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC8P31273 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
HOXC8P31273 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 AC005725.1-201ENST00000577346 2607 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 SNORA16A-201ENST00000384342 137 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 RPL23AP17-201ENST00000401064 499 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AL009179.1-201ENST00000406085 265 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 SRSF1P1-201ENST00000424058 520 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AC006455.6-201ENST00000426192 893 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC8P31273 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 RN7SKP253-201ENST00000516424 309 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC8P31273 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC8P31273 AL049874.4-201ENST00000557593 255 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC8P31273 MIR4700-201ENST00000578311 74 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AL513327.3-201ENST00000602618 469 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 QTRT1P1-201ENST00000604344 1078 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 AC109583.2-201ENST00000617367 129 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AC090527.3-201ENST00000619041 548 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 NAMPTP1-201ENST00000440465 2514 ntBASIC6.11□□□□□ -1.43
HOXC8P31273 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC8P31273 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC8P31273 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC8P31273 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXC8P31273 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC8P31273 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HOXC8P31273 AC098592.2-201ENST00000413158 265 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 AC096644.3-201ENST00000416788 338 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 RNGTTP1-201ENST00000420965 728 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 TPTE2P1-204ENST00000435256 593 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC8P31273 NANOGP9-201ENST00000439890 892 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 MEMO1P4-201ENST00000453590 386 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC8P31273 RPL15P21-201ENST00000495592 567 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 SUMO2P4-201ENST00000504193 276 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AC105420.1-201ENST00000504389 582 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC8P31273 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 AC022832.1-201ENST00000530718 645 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 RN7SL708P-201ENST00000580952 299 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC8P31273 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC8P31273 AC024940.4-201ENST00000605507 246 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 AL121612.2-201ENST00000612261 482 ntBASIC6.1□□□□□ -1.43
HOXC8P31273 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC8P31273 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXC8P31273 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms