Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A5P29400 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A5P29400 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 AC119751.6-201ENST00000416712 186 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A5P29400 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.34□□□□□ -1.39
COL4A5P29400 AC112498.1-201ENST00000444401 332 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.34□□□□□ -1.39
COL4A5P29400 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
COL4A5P29400 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.34□□□□□ -1.39
COL4A5P29400 EDDM3DP-201ENST00000554692 434 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A5P29400 AP005131.7-201ENST00000610087 611 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 OR9K1P-202ENST00000641111 3217 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
COL4A5P29400 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.34□□□□□ -1.39
COL4A5P29400 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL4A5P29400 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.34□□□□□ -1.39
COL4A5P29400 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL4A5P29400 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.34□□□□□ -1.4
COL4A5P29400 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.34□□□□□ -1.4
COL4A5P29400 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.34□□□□□ -1.4
COL4A5P29400 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 RNA5SP191-201ENST00000362585 102 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
COL4A5P29400 SNORA70H-201ENST00000383910 135 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 SNORA70J-201ENST00000384182 135 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A5P29400 RNA5SP251-201ENST00000410614 137 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 AL161722.1-201ENST00000446972 1032 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A5P29400 OR4A43P-201ENST00000532938 908 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC073869.8-201ENST00000641806 335 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL4A5P29400 OR5M12P-201ENST00000423388 929 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC012512.1-201ENST00000446594 718 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A5P29400 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.33□□□□□ -1.4
COL4A5P29400 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.33□□□□□ -1.4
COL4A5P29400 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.33□□□□□ -1.4
COL4A5P29400 MIR3667-201ENST00000581025 74 ntBASIC6.33□□□□□ -1.4
COL4A5P29400 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.33□□□□□ -1.4
COL4A5P29400 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL4A5P29400 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
COL4A5P29400 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 AL132640.2-201ENST00000559968 1698 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A5P29400 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A5P29400 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A5P29400 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 AC104964.3-201ENST00000606115 2860 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 HYDIN2-203ENST00000614586 13885 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL4A5P29400 SNORA62-201ENST00000365493 153 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.32□□□□□ -1.4
COL4A5P29400 RNA5SP113-201ENST00000410486 84 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A5P29400 RPL18P10-201ENST00000425606 538 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 HSPD1P12-201ENST00000429127 1069 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 PRPF38AP2-201ENST00000438179 851 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 IGBP1P3-201ENST00000447449 1000 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 AC091153.1-201ENST00000466297 402 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 AL161747.1-201ENST00000480068 358 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 RPL17P2-201ENST00000491913 451 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 AC093720.1-201ENST00000505681 714 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 COX6B1P5-201ENST00000509843 249 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.32□□□□□ -1.4
COL4A5P29400 OR7E128P-201ENST00000532736 1024 ntBASIC6.32□□□□□ -1.4
COL4A5P29400 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms