Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.85□□□□□ -1.47
CD40P25942 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC5.85□□□□□ -1.47
CD40P25942 AC103987.3-201ENST00000582071 292 ntBASIC5.85□□□□□ -1.47
CD40P25942 MIR4999-201ENST00000585029 91 ntBASIC5.85□□□□□ -1.47
CD40P25942 AL583832.1-201ENST00000603227 784 ntBASIC5.85□□□□□ -1.47
CD40P25942 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.85□□□□□ -1.47
CD40P25942 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.85□□□□□ -1.47
CD40P25942 AC015819.1-201ENST00000613588 663 ntBASIC5.85□□□□□ -1.47
CD40P25942 AL353726.1-201ENST00000614041 1000 ntBASIC5.85□□□□□ -1.47
CD40P25942 MIR8089-201ENST00000620165 82 ntBASIC5.85□□□□□ -1.47
CD40P25942 Z69908.1-201ENST00000622603 247 ntBASIC5.85□□□□□ -1.47
CD40P25942 AC068213.1-201ENST00000625124 226 ntBASIC5.85□□□□□ -1.47
CD40P25942 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.85□□□□□ -1.47
CD40P25942 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.85□□□□□ -1.47
CD40P25942 CASC19-212ENST00000641153 1287 ntBASIC5.85□□□□□ -1.47
CD40P25942 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 AC007996.1-201ENST00000620414 2821 ntBASIC5.85□□□□□ -1.47
CD40P25942 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.85□□□□□ -1.47
CD40P25942 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CD40P25942 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
CD40P25942 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CD40P25942 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 PARN-201ENST00000341484 2100 ntTSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD40P25942 RNA5SP321-201ENST00000362722 111 ntBASIC5.84□□□□□ -1.47
CD40P25942 RNU6-623P-201ENST00000363143 105 ntBASIC5.84□□□□□ -1.47
CD40P25942 RNU6-304P-201ENST00000364855 107 ntBASIC5.84□□□□□ -1.47
CD40P25942 RNU1-55P-201ENST00000365510 158 ntBASIC5.84□□□□□ -1.47
CD40P25942 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 RNU6-729P-201ENST00000384399 107 ntBASIC5.84□□□□□ -1.47
CD40P25942 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 RN7SKP271-201ENST00000410528 320 ntBASIC5.84□□□□□ -1.47
CD40P25942 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 KCTD10P1-201ENST00000434203 625 ntBASIC5.84□□□□□ -1.47
CD40P25942 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AL591503.2-201ENST00000442314 1005 ntBASIC5.84□□□□□ -1.47
CD40P25942 GTF3AP5-201ENST00000442645 697 ntBASIC5.84□□□□□ -1.47
CD40P25942 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AC009961.3-201ENST00000449832 765 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.84□□□□□ -1.47
CD40P25942 AC096741.1-201ENST00000472250 846 ntBASIC5.84□□□□□ -1.47
CD40P25942 RPL7P18-201ENST00000478965 734 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC080014.1-201ENST00000496877 1201 ntBASIC5.84□□□□□ -1.47
CD40P25942 WBP1LP4-201ENST00000505043 344 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.84□□□□□ -1.47
CD40P25942 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CD40P25942 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 IMPA1P1-201ENST00000510718 842 ntBASIC5.84□□□□□ -1.47
CD40P25942 RPL7L1P4-201ENST00000513004 707 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AC138517.1-201ENST00000515724 568 ntBASIC5.84□□□□□ -1.47
CD40P25942 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CD40P25942 AC024909.2-201ENST00000553035 286 ntBASIC5.84□□□□□ -1.47
CD40P25942 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CD40P25942 AC005519.1-201ENST00000554490 601 ntBASIC5.84□□□□□ -1.47
CD40P25942 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 AC006530.1-201ENST00000555980 571 ntBASIC5.84□□□□□ -1.47
CD40P25942 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 NPM1P47-201ENST00000560843 856 ntBASIC5.84□□□□□ -1.47
CD40P25942 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.84□□□□□ -1.47
CD40P25942 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 ANP32BP1-202ENST00000568553 737 ntBASIC5.84□□□□□ -1.47
CD40P25942 MIR3157-201ENST00000578688 85 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC138207.8-204ENST00000579588 527 ntBASIC5.84□□□□□ -1.47
CD40P25942 MIR4732-201ENST00000581873 76 ntBASIC5.84□□□□□ -1.47
CD40P25942 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 MIR212-201ENST00000586026 110 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.84□□□□□ -1.47
CD40P25942 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 VN1R82P-201ENST00000601481 356 ntBASIC5.84□□□□□ -1.47
CD40P25942 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.84□□□□□ -1.47
CD40P25942 AC009163.6-201ENST00000612367 342 ntBASIC5.84□□□□□ -1.47
CD40P25942 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC098679.5-201ENST00000624394 571 ntBASIC5.84□□□□□ -1.47
CD40P25942 AC007494.3-201ENST00000624660 743 ntBASIC5.84□□□□□ -1.47
CD40P25942 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.84□□□□□ -1.47
CD40P25942 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms