Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 AC073900.1-201ENST00000429766 776 ntBASIC7.85□□□□□ -1.15
RFX1P22670 RPL5P27-201ENST00000437011 881 ntBASIC7.85□□□□□ -1.15
RFX1P22670 E2F6P3-201ENST00000441743 743 ntBASIC7.85□□□□□ -1.15
RFX1P22670 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.85□□□□□ -1.15
RFX1P22670 DEFA11P-201ENST00000446470 261 ntBASIC7.85□□□□□ -1.15
RFX1P22670 OR5D2P-201ENST00000524390 911 ntBASIC7.85□□□□□ -1.15
RFX1P22670 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.85□□□□□ -1.15
RFX1P22670 OR4A21P-201ENST00000532759 944 ntBASIC7.85□□□□□ -1.15
RFX1P22670 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.85□□□□□ -1.15
RFX1P22670 AC087257.2-201ENST00000538759 928 ntBASIC7.85□□□□□ -1.15
RFX1P22670 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.85□□□□□ -1.15
RFX1P22670 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 AL357078.3-201ENST00000607528 618 ntBASIC7.85□□□□□ -1.15
RFX1P22670 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC7.85□□□□□ -1.15
RFX1P22670 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.85□□□□□ -1.15
RFX1P22670 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.85□□□□□ -1.15
RFX1P22670 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.85□□□□□ -1.15
RFX1P22670 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.85□□□□□ -1.15
RFX1P22670 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RFX1P22670 CASC19-248ENST00000641674 1356 ntBASIC7.84□□□□□ -1.15
RFX1P22670 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 AC006116.1-201ENST00000587908 2171 ntBASIC7.84□□□□□ -1.15
RFX1P22670 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.84□□□□□ -1.15
RFX1P22670 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 AC022507.1-201ENST00000548349 1505 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 RNU6-839P-201ENST00000363347 108 ntBASIC7.84□□□□□ -1.15
RFX1P22670 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 MIR621-201ENST00000384919 96 ntBASIC7.84□□□□□ -1.15
RFX1P22670 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 RAP1BP3-201ENST00000407180 549 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AC114814.2-201ENST00000419195 485 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 RPS25P9-201ENST00000435591 252 ntBASIC7.84□□□□□ -1.15
RFX1P22670 RPL14P5-201ENST00000436474 730 ntBASIC7.84□□□□□ -1.15
RFX1P22670 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 PMS2P11-201ENST00000451831 574 ntBASIC7.84□□□□□ -1.15
RFX1P22670 CBX5P1-201ENST00000468470 561 ntBASIC7.84□□□□□ -1.15
RFX1P22670 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RFX1P22670 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 SCARNA11.1-201ENST00000516918 132 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 AP001207.1-201ENST00000524051 481 ntBASIC7.84□□□□□ -1.15
RFX1P22670 OR5AK1P-201ENST00000524837 922 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 OR7E161P-201ENST00000533722 967 ntBASIC7.84□□□□□ -1.15
RFX1P22670 EGLN3P1-201ENST00000541727 720 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.84□□□□□ -1.15
RFX1P22670 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 BNIP3P30-201ENST00000601184 574 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AC083899.3-201ENST00000603413 594 ntBASIC7.84□□□□□ -1.15
RFX1P22670 RN7SL778P-201ENST00000607160 297 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AL121782.1-201ENST00000611242 413 ntBASIC7.84□□□□□ -1.15
RFX1P22670 AC008498.1-201ENST00000613012 531 ntBASIC7.84□□□□□ -1.15
RFX1P22670 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.84□□□□□ -1.15
RFX1P22670 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.84□□□□□ -1.15
RFX1P22670 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms