Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MTND6P2-201ENST00000512226 524 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 EIF3KP3-201ENST00000514461 639 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 SCARNA16.4-201ENST00000516956 187 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 SUMO2P19-201ENST00000518920 295 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC078899.1-201ENST00000521432 1185 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.25□□□□□ -1.57
COL5A1P20908 ATP5J2P6-201ENST00000565203 266 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 AC087385.3-201ENST00000620477 187 ntBASIC5.25□□□□□ -1.57
COL5A1P20908 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL5A1P20908 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.25□□□□□ -1.57
COL5A1P20908 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.25□□□□□ -1.57
COL5A1P20908 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL5A1P20908 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.24□□□□□ -1.57
COL5A1P20908 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 AC009779.8-201ENST00000641684 4384 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 CASC19-281ENST00000642118 1554 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 SNURFL-201ENST00000309296 343 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL5A1P20908 AC093162.1-201ENST00000419682 124 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 AC016712.1-201ENST00000431088 378 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.24□□□□□ -1.57
COL5A1P20908 AL596266.1-201ENST00000448132 400 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 TRY2P-201ENST00000448860 689 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 AC002075.1-201ENST00000457396 676 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 snoU13.29-201ENST00000459370 104 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 ATP5LP5-201ENST00000483050 299 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.24□□□□□ -1.57
COL5A1P20908 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 GTF2F2P1-201ENST00000511083 675 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.24□□□□□ -1.57
COL5A1P20908 snoU109.5-201ENST00000516231 132 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 RN7SKP253-201ENST00000516424 309 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 AC134698.5-201ENST00000519444 336 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 OR5AM1P-201ENST00000532136 1032 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 BNIP3P1-201ENST00000547295 580 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.24□□□□□ -1.57
COL5A1P20908 MIR6758-201ENST00000620653 63 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.24□□□□□ -1.57
COL5A1P20908 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.24□□□□□ -1.57
COL5A1P20908 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 AL355834.1-201ENST00000556602 3965 ntBASIC5.24□□□□□ -1.57
COL5A1P20908 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.24□□□□□ -1.57
COL5A1P20908 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL5A1P20908 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A1P20908 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 RPSAP35-201ENST00000413753 818 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.23□□□□□ -1.57
COL5A1P20908 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 AC104837.2-201ENST00000427236 424 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 AC097484.1-201ENST00000471148 389 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A1P20908 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.23□□□□□ -1.57
COL5A1P20908 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.23□□□□□ -1.57
COL5A1P20908 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.23□□□□□ -1.57
COL5A1P20908 BRD9P1-201ENST00000529855 560 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 AC063949.1-201ENST00000552900 865 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.23□□□□□ -1.57
COL5A1P20908 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.23□□□□□ -1.57
COL5A1P20908 AC005084.1-201ENST00000605160 304 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 AC021422.1-201ENST00000621212 473 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A1P20908 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A1P20908 ZNF969P-201ENST00000510345 2341 ntBASIC5.23□□□□□ -1.57
COL5A1P20908 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.23□□□□□ -1.57
COL5A1P20908 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.23□□□□□ -1.57
COL5A1P20908 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL5A1P20908 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms