Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL132640.2-201ENST00000559968 1698 ntBASIC9.07□□□□□ -0.96
CFTRP13569 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
CFTRP13569 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
CFTRP13569 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
CFTRP13569 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CFTRP13569 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CFTRP13569 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC9.07□□□□□ -0.96
CFTRP13569 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.07□□□□□ -0.96
CFTRP13569 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.06□□□□□ -0.96
CFTRP13569 RAD17P2-201ENST00000451754 1977 ntBASIC9.06□□□□□ -0.96
CFTRP13569 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC9.06□□□□□ -0.96
CFTRP13569 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CFTRP13569 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.06□□□□□ -0.96
CFTRP13569 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC9.06□□□□□ -0.96
CFTRP13569 SLC25A51P1-201ENST00000468432 871 ntBASIC9.06□□□□□ -0.96
CFTRP13569 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC9.06□□□□□ -0.96
CFTRP13569 AC103987.1-201ENST00000473394 348 ntBASIC9.06□□□□□ -0.96
CFTRP13569 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.06□□□□□ -0.96
CFTRP13569 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC9.06□□□□□ -0.96
CFTRP13569 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.06□□□□□ -0.96
CFTRP13569 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC9.06□□□□□ -0.96
CFTRP13569 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.06□□□□□ -0.96
CFTRP13569 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.06□□□□□ -0.96
CFTRP13569 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CFTRP13569 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
CFTRP13569 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC9.05□□□□□ -0.96
CFTRP13569 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC9.05□□□□□ -0.96
CFTRP13569 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CFTRP13569 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
CFTRP13569 AC004074.1-201ENST00000421810 1063 ntBASIC9.05□□□□□ -0.96
CFTRP13569 OR10T1P-201ENST00000424327 947 ntBASIC9.05□□□□□ -0.96
CFTRP13569 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC9.05□□□□□ -0.96
CFTRP13569 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC9.05□□□□□ -0.96
CFTRP13569 IGBP1P3-201ENST00000447449 1000 ntBASIC9.05□□□□□ -0.96
CFTRP13569 GAPDHP56-201ENST00000506031 988 ntBASIC9.05□□□□□ -0.96
CFTRP13569 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.05□□□□□ -0.96
CFTRP13569 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC9.05□□□□□ -0.96
CFTRP13569 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.05□□□□□ -0.96
CFTRP13569 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CFTRP13569 USP8-204ENST00000425032 3559 ntTSL 2 BASIC9.05□□□□□ -0.96
CFTRP13569 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CFTRP13569 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.05□□□□□ -0.96
CFTRP13569 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CFTRP13569 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.05□□□□□ -0.96
CFTRP13569 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CFTRP13569 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
CFTRP13569 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC9.05□□□□□ -0.96
CFTRP13569 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CFTRP13569 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC9.04□□□□□ -0.96
CFTRP13569 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 FAM3C2-201ENST00000312214 681 ntBASIC9.04□□□□□ -0.96
CFTRP13569 SNORD56.6-201ENST00000384569 71 ntBASIC9.04□□□□□ -0.96
CFTRP13569 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC9.04□□□□□ -0.96
CFTRP13569 AC134698.5-201ENST00000519444 336 ntBASIC9.04□□□□□ -0.96
CFTRP13569 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.04□□□□□ -0.96
CFTRP13569 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.04□□□□□ -0.96
CFTRP13569 EEF1A1P36-201ENST00000427807 1351 ntBASIC9.04□□□□□ -0.96
CFTRP13569 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CFTRP13569 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CFTRP13569 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.04□□□□□ -0.96
CFTRP13569 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CFTRP13569 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.04□□□□□ -0.96
CFTRP13569 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.04□□□□□ -0.96
CFTRP13569 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CFTRP13569 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CFTRP13569 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 RPL32P3-201ENST00000359025 275 ntBASIC9.03□□□□□ -0.96
CFTRP13569 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 RPL11P3-201ENST00000395256 523 ntBASIC9.03□□□□□ -0.96
CFTRP13569 RPS27AP7-201ENST00000422792 455 ntBASIC9.03□□□□□ -0.96
CFTRP13569 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.03□□□□□ -0.96
CFTRP13569 AC112498.1-201ENST00000444401 332 ntBASIC9.03□□□□□ -0.96
CFTRP13569 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.03□□□□□ -0.96
CFTRP13569 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.03□□□□□ -0.96
CFTRP13569 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.03□□□□□ -0.96
CFTRP13569 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC9.03□□□□□ -0.96
CFTRP13569 AC009704.2-201ENST00000618739 483 ntBASIC9.03□□□□□ -0.96
CFTRP13569 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
CFTRP13569 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CFTRP13569 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms