Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOBP04114 AC018765.1-201ENST00000623357 3446 ntBASIC3.24□□□□□ -1.89
APOBP04114 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
APOBP04114 TEK-204ENST00000519097 3836 ntTSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
APOBP04114 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOBP04114 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBP04114 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
APOBP04114 AC016027.5-201ENST00000427227 210 ntBASIC3.24□□□□□ -1.89
APOBP04114 PPIAP21-201ENST00000464473 501 ntBASIC3.24□□□□□ -1.89
APOBP04114 PPM1AP1-201ENST00000502740 1135 ntBASIC3.24□□□□□ -1.89
APOBP04114 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBP04114 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBP04114 AC024941.1-201ENST00000612250 334 ntBASIC3.24□□□□□ -1.89
APOBP04114 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
APOBP04114 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
APOBP04114 CAST-222ENST00000508579 1758 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 AL137100.1-201ENST00000556703 1620 ntBASIC3.23□□□□□ -1.89
APOBP04114 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 WBP11P1-201ENST00000562560 1931 ntBASIC3.23□□□□□ -1.89
APOBP04114 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 CYP2AC1P-201ENST00000407830 1173 ntBASIC3.23□□□□□ -1.89
APOBP04114 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 AL356390.1-201ENST00000455684 397 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC006427.1-201ENST00000514359 712 ntBASIC3.23□□□□□ -1.89
APOBP04114 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 AP005119.2-201ENST00000579735 1105 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC067931.1-201ENST00000624190 671 ntBASIC3.23□□□□□ -1.89
APOBP04114 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.23□□□□□ -1.89
APOBP04114 RNA5SP447-201ENST00000363749 119 ntBASIC3.23□□□□□ -1.89
APOBP04114 HMGB3P7-201ENST00000400214 611 ntBASIC3.23□□□□□ -1.89
APOBP04114 AL121977.1-201ENST00000401636 979 ntBASIC3.23□□□□□ -1.89
APOBP04114 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 RIMKLBP2-201ENST00000424737 654 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
APOBP04114 AC125494.2-201ENST00000602431 657 ntBASIC3.23□□□□□ -1.89
APOBP04114 OR8B1P-202ENST00000641132 1178 ntBASIC3.23□□□□□ -1.89
APOBP04114 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 AP003972.1-201ENST00000625192 5446 ntBASIC3.23□□□□□ -1.89
APOBP04114 ALB-220ENST00000621628 1606 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 LRRC37A6P-202ENST00000448648 5444 ntBASIC3.23□□□□□ -1.89
APOBP04114 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 ZNF840P-201ENST00000504759 1996 ntBASIC3.23□□□□□ -1.89
APOBP04114 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 MIR208A-201ENST00000362287 71 ntBASIC3.23□□□□□ -1.89
APOBP04114 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 MIR105-1-201ENST00000385222 81 ntBASIC3.23□□□□□ -1.89
APOBP04114 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 AC011742.2-201ENST00000443818 352 ntBASIC3.23□□□□□ -1.89
APOBP04114 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 AC006967.1-201ENST00000467608 589 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC079080.1-201ENST00000479841 822 ntBASIC3.23□□□□□ -1.89
APOBP04114 SNORA67.7-201ENST00000516664 135 ntBASIC3.23□□□□□ -1.89
APOBP04114 SCARNA16.4-201ENST00000516956 187 ntBASIC3.23□□□□□ -1.89
APOBP04114 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBP04114 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.23□□□□□ -1.89
APOBP04114 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBP04114 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBP04114 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
APOBP04114 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
APOBP04114 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms