Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP000811.1-201ENST00000603803 651 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 AL031601.1-201ENST00000605702 394 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.08□□□□□ -1.44
CNOT4O95628 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.08□□□□□ -1.44
CNOT4O95628 AP000254.1-201ENST00000609934 520 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 AL138478.1-201ENST00000612252 832 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 AC024257.5-201ENST00000612739 531 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.08□□□□□ -1.44
CNOT4O95628 AL355480.1-201ENST00000629041 99 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 AC183089.2-201ENST00000637931 916 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.08□□□□□ -1.44
CNOT4O95628 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNOT4O95628 VPS35P1-201ENST00000563400 1518 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 KARSP3-201ENST00000571212 1504 ntBASIC6.08□□□□□ -1.44
CNOT4O95628 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CNOT4O95628 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNOT4O95628 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNOT4O95628 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNOT4O95628 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.08□□□□□ -1.44
CNOT4O95628 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNOT4O95628 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNOT4O95628 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 SMG1P7-201ENST00000565246 2704 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 RNU6-236P-201ENST00000363886 106 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RNA5SP152-201ENST00000365184 110 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RNA5SP279-201ENST00000365513 117 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 RNU6-83P-201ENST00000384568 112 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 SNORD94-201ENST00000386037 137 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL079341.1-201ENST00000404701 1207 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RAP1BP3-201ENST00000407180 549 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 RPA2P2-201ENST00000419698 796 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 AHCYP8-201ENST00000425108 209 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CNOT4O95628 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 NANOGP2-201ENST00000435391 727 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 RPL7AP71-201ENST00000451120 739 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 RN7SL143P-201ENST00000496780 297 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 PFN1P8-201ENST00000497012 543 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.07□□□□□ -1.44
CNOT4O95628 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.07□□□□□ -1.44
CNOT4O95628 MTCYBP41-201ENST00000528913 1123 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 OR9L1P-201ENST00000529493 933 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CNOT4O95628 OR4A21P-201ENST00000532759 944 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 RN7SL199P-201ENST00000578752 281 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RN7SL656P-201ENST00000579044 281 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.07□□□□□ -1.44
CNOT4O95628 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.07□□□□□ -1.44
CNOT4O95628 ZNF415P1-201ENST00000582279 1166 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RN7SL404P-201ENST00000582421 281 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC022069.1-201ENST00000582910 658 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC087575.1-201ENST00000585087 229 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 AC020914.7-201ENST00000594477 545 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL020997.3-201ENST00000602843 359 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AP001981.2-201ENST00000603241 418 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC004908.1-201ENST00000606572 541 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AP000255.1-201ENST00000610276 676 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL137000.1-201ENST00000610528 1244 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.07□□□□□ -1.44
CNOT4O95628 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AC015540.1-201ENST00000615828 501 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 RMST_10.1-201ENST00000616309 154 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 AL121890.3-201ENST00000618494 516 ntBASIC6.07□□□□□ -1.44
CNOT4O95628 MIR6849-201ENST00000618543 69 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms