Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.34□□□□□ -1.07
RAPGEF3O95398 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
RAPGEF3O95398 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
RAPGEF3O95398 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
RAPGEF3O95398 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
RAPGEF3O95398 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AL353625.1-202ENST00000366273 571 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 RNU6-883P-201ENST00000384597 107 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 MIR640-201ENST00000385086 96 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC019050.1-201ENST00000418508 492 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 AL390879.2-203ENST00000426943 1121 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 RPS3AP38-201ENST00000435889 763 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 PRPF38AP2-201ENST00000438179 851 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 RPL7P16-201ENST00000479738 738 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AL136520.1-202ENST00000555494 763 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AGGF1P7-201ENST00000562369 913 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC015802.5-201ENST00000607478 399 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC012414.7-202ENST00000622705 1090 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 AC016717.3-201ENST00000624730 554 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AL590396.2-201ENST00000636511 1041 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RAPGEF3O95398 OLMALINC-203ENST00000641087 3779 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 NLRP3P1-201ENST00000622303 1785 ntBASIC8.33□□□□□ -1.08
RAPGEF3O95398 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
RAPGEF3O95398 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 SPATA31C1-201ENST00000420021 3895 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 SNURFL-201ENST00000309296 343 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 RNA5SP505-201ENST00000364748 108 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC068538.1-201ENST00000376856 336 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 MTND2P15-201ENST00000418575 892 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 RN7SL165P-201ENST00000477476 291 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC093799.2-201ENST00000610062 578 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC099494.2-201ENST00000623371 978 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC091905.4-201ENST00000623432 202 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 MAPK10-365ENST00000641902 3825 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
RAPGEF3O95398 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 AL391261.1-201ENST00000555712 1479 ntBASIC8.32□□□□□ -1.08
RAPGEF3O95398 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RAPGEF3O95398 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 RPS4XP9-201ENST00000405151 780 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 COX6B1P1-201ENST00000415962 213 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 P2RY10P2-201ENST00000416730 913 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 FTH1P10-202ENST00000430907 550 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC096775.1-201ENST00000437724 448 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms