Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 MIR3189-201ENST00000578735 73 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AP002884.5-201ENST00000595053 1132 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC026979.4-201ENST00000606555 645 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AL591167.1-201ENST00000607321 456 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AL008723.3-201ENST00000608926 449 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC093388.1-201ENST00000609166 430 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC245014.3-201ENST00000618589 347 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC069234.4-201ENST00000621276 412 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC127024.6-201ENST00000621598 424 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 AC006963.1-201ENST00000624003 1052 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM38O00635 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM38O00635 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM38O00635 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TRIM38O00635 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 AC140479.2-201ENST00000421567 3130 ntBASIC6.09□□□□□ -1.43
TRIM38O00635 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM38O00635 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM38O00635 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
TRIM38O00635 MTCO1P11-201ENST00000429111 1528 ntBASIC6.09□□□□□ -1.44
TRIM38O00635 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
TRIM38O00635 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM38O00635 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM38O00635 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
TRIM38O00635 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC092070.2-203ENST00000598377 3644 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM38O00635 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM38O00635 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 TMSB4XP2-201ENST00000335179 210 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 RNFT1P3-201ENST00000340898 1052 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 RNU1-49P-201ENST00000363468 159 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM38O00635 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 RNA5SP284-201ENST00000384547 118 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 RNU11-201ENST00000387069 134 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL096800.1-201ENST00000405326 893 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM38O00635 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 UBE2D3P3-201ENST00000426992 425 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 PPIAP10-201ENST00000438675 458 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 CFL1P4-201ENST00000451536 498 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 ACA64.1-201ENST00000459171 127 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC090958.1-201ENST00000511122 351 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AC114781.3-201ENST00000512083 142 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 RNA5SP434-201ENST00000516647 121 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM38O00635 AP003396.4-201ENST00000527574 265 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL512310.9-201ENST00000553311 948 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 RPA2P1-201ENST00000556557 721 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM38O00635 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 BNIP3P27-201ENST00000599991 412 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL360012.1-201ENST00000602813 131 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 MTATP6P2-201ENST00000603319 678 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AC108673.3-201ENST00000609183 335 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 AL031658.2-201ENST00000616850 651 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM38O00635 MIR7159-201ENST00000620587 66 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 AP000943.4-201ENST00000622912 357 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC090617.9-201ENST00000623751 147 ntBASIC6.08□□□□□ -1.44
TRIM38O00635 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM38O00635 AC073488.3-201ENST00000631611 778 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms